RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PHF20Q9BVI0 1012 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 LACRTQ9GZZ8 138 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CNOT10Q9H9A5 744 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NHEJ1Q9H9Q4 299 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 ZSWIM5Q9P217 1185 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 ZNF532Q9HCE3 1301 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 A0A0G2JLW4 131 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 DDAH1O94760 285 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 RXRAP19793 462 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 LSP1P33241 339 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 MDH1P40925 334 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 MRPL12P52815 198 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 SLC8A3P57103 927 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 IFI16Q16666 785 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NAA35Q5VZE5 725 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 GALNT17Q6IS24 598 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CREG2Q8IUH2 290 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 RIN2Q8WYP3 895 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CCT8L2Q96SF2 557 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 JPH2Q9BR39 696 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 DLG5Q8TDM6 1919 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NFAT5O94916 1531 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 STAT6P42226 847 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 FNTAP49354 379 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NAP1L1P55209 391 aaKnown RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 NLRP14Q86W24 1093 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 CHP1Q99653 195 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 VCPKMTQ9H867 229 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 XDHP47989 1333 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 GOLGA6L10A0A0M3HER8 536 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 PJA2O43164 708 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 GNAQP50148 359 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 LMOD2Q6P5Q4 547 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 GIMAP8Q8ND71 665 aaPredicted RBP5.31□□□□□ -1.56
PTPN13-201ENST00000316707 LPIN2Q92539 896 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 GDAP1L1Q96MZ0 367 aa5.31□□□□□ -1.56
PTPN13-201ENST00000316707 MACROD2A1Z1Q3 448 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 KIF5BP33176 963 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 GRIN1Q05586 938 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 WLSQ5T9L3 541 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 MYCBPAPQ8TBZ2 947 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CALR3Q96L12 384 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 AK8Q96MA6 479 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CCSER1Q9C0I3 900 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CNNM1Q9NRU3 951 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 HDAC6Q9UBN7 1215 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 TUBGCP6Q96RT7 1819 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PPP1R12AO14974 1030 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 HSPA9P38646 679 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 SKIDA1Q1XH10 827 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PAXIP1Q6ZW49 1069 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PUS3Q9BZE2 481 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 TCP11L1Q9NUJ3 509 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 AKAP12Q02952 1782 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC194A0A1B0GVG4 234 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 HEXIM1O94992 359 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PDE8BO95263 885 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 GHRP10912 638 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 GCFC2P16383 781 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CDC25AP30304 524 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 HERVK_113P62684 666 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC178Q5BJE1 867 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 KCNV1Q6PIU1 500 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 ZSCAN29Q8IWY8 852 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CACNA2D3Q8IZS8 1091 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 OSBPL9Q96SU4 736 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 MYL10Q9BUA6 226 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 NOC4LQ9BVI4 516 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 SH2D4AQ9H788 454 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 SUFUQ9UMX1 484 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CCDC188H7C350 402 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 RASSF9O75901 435 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 MBD4O95243 580 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 MYZAPP0CAP1 466 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 SLC5A1P13866 664 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 ARID4AP29374 1257 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PRPHP41219 470 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 EIF3BP55884 814 aaKnown RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PTGDRQ13258 359 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 FBXW10Q5XX13 1052 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CRELD2Q6UXH1 353 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 SYN2Q92777 582 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 P2RX5Q93086 422 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 LRRC1Q9BTT6 524 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 TRIM6Q9C030 488 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 ERVV-2B6SEH9 535 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 ANXA13P27216 316 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 ORC2Q13416 577 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 ZKSCAN8Q15776 578 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 COBLL1Q53SF7 1204 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 TTLL11Q8NHH1 800 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PLCD4Q9BRC7 762 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PLCB1Q9NQ66 1216 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 V9GY48 417 aaPredicted RBP5.3□□□□□ -1.56
PTPN13-201ENST00000316707 CACNA1FO60840 1977 aa5.3□□□□□ -1.56
PTPN13-201ENST00000316707 PDE2AO00408 941 aaPredicted RBP5.29□□□□□ -1.56
PTPN13-201ENST00000316707 MYBL2P10244 700 aa5.29□□□□□ -1.56
PTPN13-201ENST00000316707 WDR59Q6PJI9 974 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms