RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 STAG1Q8WVM7 1258 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 TRIM43Q96BQ3 446 aaPredicted RBP14.28□□□□□ -0.12
ABCD3-201ENST00000315713 CDX2Q99626 313 aaPredicted RBP14.28□□□□□ -0.12
ABCD3-201ENST00000315713 ESYT1Q9BSJ8 1104 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 FBXO28Q9NVF7 368 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 SLC5A4Q9NY91 659 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 MTMR4Q9NYA4 1195 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 NYAP2Q9P242 653 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 TACC3Q9Y6A5 838 aa14.28□□□□□ -0.12
ABCD3-201ENST00000315713 PGK1P00558 417 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 PGK2P07205 417 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 FGRP09769 529 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 FCER1AP12319 257 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 PTH1RQ03431 593 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 MAFAQ8NHW3 353 aaPredicted RBP14.27□□□□□ -0.13
ABCD3-201ENST00000315713 MMP19Q99542 508 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
ABCD3-201ENST00000315713 XPNPEP3Q9NQH7 507 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 STX8Q9UNK0 236 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 PHF24Q9UPV7 400 aa14.27□□□□□ -0.13
ABCD3-201ENST00000315713 U3KPZ7 1027 aaPredicted RBP14.27□□□□□ -0.13
ABCD3-201ENST00000315713 NEDD4P46934 1319 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 RARBP10826 455 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 TAL1P17542 331 aaPredicted RBP14.26□□□□□ -0.13
ABCD3-201ENST00000315713 ITGB8P26012 769 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 TLE2Q04725 743 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
ABCD3-201ENST00000315713 MYLIPQ8WY64 445 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 ESR2Q92731 530 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 SEMA6BQ9H3T3 888 aa14.26□□□□□ -0.13
ABCD3-201ENST00000315713 A0A1W2PQ45 241 aaPredicted RBP14.25□□□□□ -0.13
ABCD3-201ENST00000315713 A0A1W2PQY0 241 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 NMT2O60551 498 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 PQBP1O60828 265 aaKnown RBP14.25□□□□□ -0.13
ABCD3-201ENST00000315713 SLC25A27O95847 323 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 SMAD3P84022 425 aaKnown RBP14.25□□□□□ -0.13
ABCD3-201ENST00000315713 C1orf53Q5VUE5 145 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 RIOX2Q8IUF8 465 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 ANO2Q9NQ90 1003 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 ADAMTS5Q9UNA0 930 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 NCOR1O75376 2440 aa14.25□□□□□ -0.13
ABCD3-201ENST00000315713 F5H6K3 240 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 VWA5AO00534 786 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 KDM4AO75164 1064 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 CLTBP09497 229 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 EPHB4P54760 987 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 KLRC3Q07444 240 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 TRDNQ13061 729 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 ZNF792Q3KQV3 632 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 FAM83BQ5T0W9 1011 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 MKL1Q969V6 931 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 RNPC3Q96LT9 517 aaKnown RBP14.24□□□□□ -0.13
ABCD3-201ENST00000315713 TINF2Q9BSI4 451 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 KRT23Q9C075 422 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 CNNM2Q9H8M5 875 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 IL17RBQ9NRM6 502 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 ZNF214Q9UL59 606 aaPredicted RBP14.24□□□□□ -0.13
ABCD3-201ENST00000315713 PPP1R9AQ9ULJ8 1098 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 ISY1Q9ULR0 285 aaKnown RBP14.24□□□□□ -0.13
ABCD3-201ENST00000315713 SYNPO2Q9UMS6 1093 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 RBM8AQ9Y5S9 174 aaKnown RBP14.24□□□□□ -0.13
ABCD3-201ENST00000315713 CHD7Q9P2D1 2997 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 CHD9Q3L8U1 2897 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 REV3LO60673 3130 aa14.24□□□□□ -0.13
ABCD3-201ENST00000315713 SYNRGQ9UMZ2 1314 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 B4E1Z4 1266 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 NDUFB10O96000 172 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 CYP21A2P08686 494 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 ZNF865P0CJ78 1059 aaPredicted RBP14.23□□□□□ -0.13
ABCD3-201ENST00000315713 FOSL2P15408 326 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 NT5C2P49902 561 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
ABCD3-201ENST00000315713 KCTD2Q14681 263 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 RNF180Q86T96 592 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 IQCA1Q86XH1 822 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 REPS2Q8NFH8 660 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 NUP88Q99567 741 aaPredicted RBP14.23□□□□□ -0.13
ABCD3-201ENST00000315713 LSG1Q9H089 658 aaKnown RBP14.23□□□□□ -0.13
ABCD3-201ENST00000315713 TCP11L1Q9NUJ3 509 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 MTMR7Q9Y216 660 aa14.23□□□□□ -0.13
ABCD3-201ENST00000315713 KIAA0355O15063 1070 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 ADAMTS4O75173 837 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 AKR1A1P14550 325 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 STAT3P40763 770 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 SLFN13Q68D06 897 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 RALYLQ86SE5 291 aaKnown RBP14.22□□□□□ -0.13
ABCD3-201ENST00000315713 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 ZKSCAN3Q9BRR0 538 aa14.22□□□□□ -0.13
ABCD3-201ENST00000315713 DIS3Q9Y2L1 958 aaKnown RBP14.22□□□□□ -0.13
ABCD3-201ENST00000315713 TOP1P11387 765 aaKnown RBP14.21□□□□□ -0.13
ABCD3-201ENST00000315713 RAG1P15918 1043 aa14.21□□□□□ -0.13
ABCD3-201ENST00000315713 FPGSQ05932 587 aa14.21□□□□□ -0.13
ABCD3-201ENST00000315713 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
ABCD3-201ENST00000315713 NCOA7Q8NI08 942 aa14.21□□□□□ -0.13
ABCD3-201ENST00000315713 UBAC1Q9BSL1 405 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms