RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 BLOC1S2Q6QNY1 142 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 DHX32Q7L7V1 743 aaKnown RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 CCDC144CPQ8IYA2 1237 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 GPRC5AQ8NFJ5 357 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 NUP133Q8WUM0 1156 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 IRX2Q9BZI1 471 aaPredicted RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 UPF3BQ9BZI7 483 aaKnown RBP9.2□□□□□ -0.94
CDC42-201ENST00000315554 UBA5Q9GZZ9 404 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 PORCNQ9H237 461 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 HOXC10Q9NYD6 342 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 SYNPO2Q9UMS6 1093 aa9.2□□□□□ -0.94
CDC42-201ENST00000315554 VWA5AO00534 786 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 ARHGAP33O14559 1287 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 SLC34A2O95436 690 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 FMNL1O95466 1100 aaPredicted RBP9.19□□□□□ -0.94
CDC42-201ENST00000315554 NT5C2P49902 561 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 STAT2P52630 851 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 FGD1P98174 961 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 ZNF543Q08ER8 600 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 KIF22Q14807 665 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 TMEM132BQ14DG7 1078 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 FAM110CQ1W6H9 321 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 CCDC174Q6PII3 467 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 LBX2Q6XYB7 198 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 Q6ZUG5 572 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 ZNF654Q8IZM8 581 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 CPXCR1Q8N123 301 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 STAG2Q8N3U4 1231 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 ERO1AQ96HE7 468 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 TRIM47Q96LD4 638 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
CDC42-201ENST00000315554 EFCC1Q9HA90 598 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 RAVER2Q9HCJ3 691 aaKnown RBP9.19□□□□□ -0.94
CDC42-201ENST00000315554 PRDM10Q9NQV6 1147 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 MORF4L1Q9UBU8 362 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 FEM1BQ9UK73 627 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 PRR12Q9ULL5 1215 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
CDC42-201ENST00000315554 NAP1L2Q9ULW6 460 aaPredicted RBP9.19□□□□□ -0.94
CDC42-201ENST00000315554 RABGAP1Q9Y3P9 1069 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 TRIM17Q9Y577 477 aa9.19□□□□□ -0.94
CDC42-201ENST00000315554 CTDP1Q9Y5B0 961 aaPredicted RBP9.19□□□□□ -0.94
CDC42-201ENST00000315554 RLFQ13129 1914 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 CCDC69A6NI79 296 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 EPB41L2O43491 1005 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 HRO43593 1189 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 PARP1P09874 1014 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 NUDT7P0C024 238 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 SNHG28P0DPA3 235 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 RPS6KB1P23443 525 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 PSMA5P28066 241 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 APOBRQ0VD83 1088 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 NOM1Q5C9Z4 860 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 SYDE2Q5VT97 1194 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 CATIPQ7Z7H3 387 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 CCAR1Q8IX12 1150 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 PRPF38AQ8NAV1 312 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 REPS2Q8NFH8 660 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 CHURC1Q8WUH1 139 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 PIBF1Q8WXW3 757 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 BRF1Q92994 677 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 TMEM87BQ96K49 555 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 MOV10L1Q9BXT6 1211 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 CWC22Q9HCG8 908 aaKnown RBP9.18□□□□□ -0.94
CDC42-201ENST00000315554 VAT1LQ9HCJ6 419 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 BRPF3Q9ULD4 1205 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 LHX6Q9UPM6 363 aa9.18□□□□□ -0.94
CDC42-201ENST00000315554 MYPNQ86TC9 1320 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 TNPO2O14787 897 aaKnown RBP9.17□□□□□ -0.94
CDC42-201ENST00000315554 DHX16O60231 1041 aaKnown RBP9.17□□□□□ -0.94
CDC42-201ENST00000315554 ZBED4O75132 1171 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 FCGRTP55899 365 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 TROAPQ12815 778 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 GRM4Q14833 912 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 SLC35G1Q2M3R5 365 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
CDC42-201ENST00000315554 RUFY3Q7L099 469 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 OTOP1Q7RTM1 612 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 CTU1Q7Z7A3 348 aaKnown RBP9.17□□□□□ -0.94
CDC42-201ENST00000315554 FAM160B2Q86V87 743 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 MICU3Q86XE3 530 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 NCAPG2Q86XI2 1143 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
CDC42-201ENST00000315554 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 SPATC1LQ9H0A9 340 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 HOMER2Q9NSB8 354 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 MAD2L2Q9UI95 211 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 GABRQQ9UN88 632 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 ADAMTS5Q9UNA0 930 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 SLC12A7Q9Y666 1083 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 PARP14Q460N5 1801 aa9.17□□□□□ -0.94
CDC42-201ENST00000315554 KLF18A0A0U1RQI7 1052 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 PLEKHA8P1O95397 391 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 ERCC3P19447 782 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 STAT3P40763 770 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 LIFRP42702 1097 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 PRKCZQ05513 592 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 ASPRV1Q53RT3 343 aa9.16□□□□□ -0.94
CDC42-201ENST00000315554 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms