RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 ANKRD44Q8N8A2 993 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 PPP1R14CQ8TAE6 165 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 GFM2Q969S9 779 aaKnown RBP10.27□□□□□ -0.77
BDNF-201ENST00000314915 C2orf49Q9BVC5 232 aaPredicted RBP10.27□□□□□ -0.77
BDNF-201ENST00000314915 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 SLC30A1Q9Y6M5 507 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 TTC21AQ8NDW8 1320 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 PDE6CP51160 858 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 GPSM2P81274 684 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 ATP11AP98196 1134 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 IRGCQ6NXR0 463 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 DAAM2Q86T65 1068 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 CCDC110Q8TBZ0 833 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 APPBP2Q92624 585 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 SEC62Q99442 399 aaKnown RBP10.27□□□□□ -0.77
BDNF-201ENST00000314915 SIKE1Q9BRV8 207 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 FADS3Q9Y5Q0 445 aa10.27□□□□□ -0.77
BDNF-201ENST00000314915 HSPA1AP0DMV8 641 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 HSPA1BP0DMV9 641 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 SDSP20132 328 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 AGAP9Q5VTM2 703 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 FBF1Q8TES7 1133 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 CCDC28BQ9BUN5 200 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 DLGAP2Q9P1A6 1054 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 CTTNBP2NLQ9P2B4 639 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 HNRNPRO43390 633 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 HIP1RO75146 1068 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 PDCP20941 246 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 MDH1P40925 334 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 LACTBP83111 547 aaPredicted RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 BOLA3Q53S33 107 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 COBLL1Q53SF7 1204 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 RUBCNQ92622 972 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 GPR101Q96P66 508 aaPredicted RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 ZNF304Q9HCX3 659 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 SEPT10Q9P0V9 454 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 SNAPC4Q5SXM2 1469 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 GBP1P32455 592 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 SERPINB8P50452 374 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 MAP3K12Q12852 859 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 RNF220Q5VTB9 566 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 RUFY4Q6ZNE9 571 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 MAP7D3Q8IWC1 876 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 ABTB1Q969K4 478 aaPredicted RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 HNRNPABQ99729 332 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 DCTPP1Q9H773 170 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 PFDN4Q9NQP4 134 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 SCHIP1Q9P0W5 487 aaPredicted RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 GLE1Q53GS7 698 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 SPDYCQ5MJ68 293 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 ACMSDQ8TDX5 336 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 LENG1Q96BZ8 264 aaPredicted RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 IFT43Q96FT9 208 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 VMP1Q96GC9 406 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 CHPF2Q9P2E5 772 aa10.26□□□□□ -0.77
BDNF-201ENST00000314915 LARSQ9P2J5 1176 aaKnown RBP10.26□□□□□ -0.77
BDNF-201ENST00000314915 GMNCA6NCL1 334 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 NR1I2O75469 434 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 RPL17P18621 184 aaKnown RBP10.25□□□□□ -0.77
BDNF-201ENST00000314915 WTAPQ15007 396 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 INIPQ9NRY2 104 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 ATAD3AQ9NVI7 634 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 SSH2Q76I76 1423 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 MYOM2P54296 1465 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 MAP4K4O95819 1239 aaPredicted RBP10.25□□□□□ -0.77
BDNF-201ENST00000314915 KRT14P02533 472 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 SKIP12755 728 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 S100A5P33763 92 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 ACADVLP49748 655 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 KIF11P52732 1056 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 LSAMPQ13449 338 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 ATL3Q6DD88 541 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 UBE3BQ7Z3V4 1068 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 ZNF804AQ7Z570 1209 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 SCUBE1Q8IWY4 988 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 RPS6KC1Q96S38 1066 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 LIMCH1Q9UPQ0 1083 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 RFC5P40937 340 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 NLRP9Q7RTR0 991 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 NOC3LQ8WTT2 800 aaKnown RBP10.25□□□□□ -0.77
BDNF-201ENST00000314915 CCT6BQ92526 530 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 SKA1Q96BD8 255 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 NAPGQ99747 312 aaPredicted RBP10.25□□□□□ -0.77
BDNF-201ENST00000314915 AS3MTQ9HBK9 375 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 TSC22D4Q9Y3Q8 395 aa10.25□□□□□ -0.77
BDNF-201ENST00000314915 CFAP69A5D8W1 941 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 ACADSP16219 412 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 VARSP26640 1264 aaKnown RBP10.24□□□□□ -0.77
BDNF-201ENST00000314915 SPIDRQ14159 915 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 CCDC122Q5T0U0 273 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 OR52E8Q6IFG1 317 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 CYP26C1Q6V0L0 522 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 ANKS4BQ8N8V4 417 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 SEC16BQ96JE7 1060 aa10.24□□□□□ -0.77
BDNF-201ENST00000314915 PHF23Q9BUL5 403 aaPredicted RBP10.24□□□□□ -0.77
BDNF-201ENST00000314915 DHX36Q9H2U1 1008 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms