RNA–Protein interactions for RNA: ENST00000314754.12

CD55-201, Transcript of CD55 molecule (Cromer blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD55, Length 2,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-201ENST00000314754 KCNJ6P48051 423 aa21.58■■□□□ 1.05
CD55-201ENST00000314754 REXO1Q8N1G1 1221 aaKnown RBP21.58■■□□□ 1.05
CD55-201ENST00000314754 DHX36Q9H2U1 1008 aaKnown RBP21.58■■□□□ 1.05
CD55-201ENST00000314754 SYNRGQ9UMZ2 1314 aa21.58■■□□□ 1.04
CD55-201ENST00000314754 CD44P16070 742 aaKnown RBP21.57■■□□□ 1.04
CD55-201ENST00000314754 STAT6P42226 847 aa21.57■■□□□ 1.04
CD55-201ENST00000314754 ZNF543Q08ER8 600 aa21.57■■□□□ 1.04
CD55-201ENST00000314754 SPATA1Q5VX52 437 aa21.57■■□□□ 1.04
CD55-201ENST00000314754 NEK8Q86SG6 692 aa21.57■■□□□ 1.04
CD55-201ENST00000314754 CCSER1Q9C0I3 900 aa21.57■■□□□ 1.04
CD55-201ENST00000314754 TMEM232C9JQI7 657 aa21.57■■□□□ 1.04
CD55-201ENST00000314754 GTF2F1P35269 517 aaKnown RBP eCLIP21.57■■□□□ 1.045e-8■■□□□ 14.5
CD55-201ENST00000314754 ORC2Q13416 577 aaPredicted RBP21.57■■□□□ 1.04
CD55-201ENST00000314754 KARSQ15046 597 aaKnown RBP21.57■■□□□ 1.04
CD55-201ENST00000314754 SAMSN1Q9NSI8 373 aaKnown RBP21.57■■□□□ 1.04
CD55-201ENST00000314754 USP27XA6NNY8 438 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 PPP1R3GB7ZBB8 358 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 TNNT1P13805 278 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 SMYD4Q8IYR2 804 aaPredicted RBP21.56■■□□□ 1.04
CD55-201ENST00000314754 CCAR2Q8N163 923 aaKnown RBP21.56■■□□□ 1.04
CD55-201ENST00000314754 AK8Q96MA6 479 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 IDI2Q9BXS1 227 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 BLZF1Q9H2G9 400 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 PP2D1A8MPX8 630 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 CCNT1O60563 726 aaKnown RBP21.56■■□□□ 1.04
CD55-201ENST00000314754 OR52Z1P0C646 297 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 UBA7P41226 1012 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 SLC15A2Q16348 729 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 LETM2Q2VYF4 491 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 GPATCH4Q5T3I0 446 aaKnown RBP21.56■■□□□ 1.04
CD55-201ENST00000314754 KLHL10Q6JEL2 608 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 C7orf43Q8WVR3 580 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 DNAJC18Q9H819 358 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 RMND1Q9NWS8 449 aa21.56■■□□□ 1.04
CD55-201ENST00000314754 FAM196BA6NMK8 535 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 MPHOSPH10O00566 681 aaKnown RBP21.55■■□□□ 1.04
CD55-201ENST00000314754 NPM3O75607 178 aaKnown RBP21.55■■□□□ 1.04
CD55-201ENST00000314754 EZH2Q15910 746 aaKnown RBP21.55■■□□□ 1.04
CD55-201ENST00000314754 SHROOM1Q2M3G4 852 aaPredicted RBP21.55■■□□□ 1.04
CD55-201ENST00000314754 CCDC112Q8NEF3 446 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 GPCPD1Q9NPB8 672 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 SERPINA10Q9UK55 444 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 TCP10Q12799 353 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 NAALADL2Q58DX5 795 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 RRAGBQ5VZM2 374 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 TBCKQ8TEA7 893 aa21.55■■□□□ 1.04
CD55-201ENST00000314754 PNMA6FA0A0J9YX94 578 aa21.54■■□□□ 1.04
CD55-201ENST00000314754 ADCY7P51828 1080 aa21.54■■□□□ 1.04
CD55-201ENST00000314754 RBM5P52756 815 aaKnown RBP eCLIP21.54■■□□□ 1.04
CD55-201ENST00000314754 PPP1R18Q6NYC8 613 aa21.54■■□□□ 1.04
CD55-201ENST00000314754 NYAP1Q6ZVC0 841 aa21.54■■□□□ 1.04
CD55-201ENST00000314754 RASSF8Q8NHQ8 419 aa21.54■■□□□ 1.04
CD55-201ENST00000314754 PI4KBQ9UBF8 816 aa21.54■■□□□ 1.04
CD55-201ENST00000314754 BIN2Q9UBW5 565 aaPredicted RBP21.54■■□□□ 1.04
CD55-201ENST00000314754 MYL1P05976 194 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 AOC3Q16853 763 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 CC2D2BQ6DHV5 1058 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 ADGRF4Q8IZF3 695 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 JMJD4Q9H9V9 463 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 FAM198AQ9UFP1 575 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 RPN1P04843 607 aaKnown RBP21.53■■□□□ 1.04
CD55-201ENST00000314754 ZNF658Q5TYW1 1059 aaPredicted RBP21.53■■□□□ 1.04
CD55-201ENST00000314754 CDKAL1Q5VV42 579 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 JAKMIP3Q5VZ66 844 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 COA7Q96BR5 231 aa21.53■■□□□ 1.04
CD55-201ENST00000314754 A0A1B0GTH6 734 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 STX17P56962 302 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 EN1Q05925 392 aaPredicted RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 PTPN14Q15678 1187 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 SPECC1LQ69YQ0 1117 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 TMX1Q9H3N1 280 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 CUEDC2Q9H467 287 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 TMEM260Q9NX78 707 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 PSDA5PKW4 1024 aaPredicted RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 DDTLA6NHG4 134 aaPredicted RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 ATP2B2Q01814 1243 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 TBX2Q13207 712 aaPredicted RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 E4F1Q66K89 784 aaPredicted RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 TTBK2Q6IQ55 1244 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 MAGEF1Q9HAY2 307 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 KBTBD4Q9NVX7 518 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 TRMT1Q9NXH9 659 aaKnown RBP21.52■■□□□ 1.04
CD55-201ENST00000314754 STK32BQ9NY57 414 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 PAXBP1Q9Y5B6 917 aa21.52■■□□□ 1.04
CD55-201ENST00000314754 GOLGA8FQ08AF8 430 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 GOLGA8DPQ0D2H9 430 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 SEMA3FQ13275 785 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 NR1I3Q14994 352 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 CCDC96Q2M329 555 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 SH3BP5LQ7L8J4 393 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 APTXQ7Z2E3 356 aaKnown RBP21.51■■□□□ 1.03
CD55-201ENST00000314754 SUPT20HQ8NEM7 779 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 RWDD2AQ9UIY3 292 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 CTNND2Q9UQB3 1225 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 RIOK3O14730 519 aaKnown RBP21.51■■□□□ 1.03
CD55-201ENST00000314754 CEP135Q66GS9 1140 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 LRRC15Q8TF66 581 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 MTMR8Q96EF0 704 aa21.51■■□□□ 1.03
CD55-201ENST00000314754 CAMKK2Q96RR4 588 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms