RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PPP4R3BQ5MIZ7 849 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 AOPEPQ8N6M6 819 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 FERMT2Q96AC1 680 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 NAT10Q9H0A0 1025 aaKnown RBP25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 TMEM260Q9NX78 707 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 A0A087X0B3 334 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 GOLGA6L6A8MZA4 724 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 F5H6K3 240 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 GNA11P29992 359 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 KLRC3Q07444 240 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 JAKMIP3Q5VZ66 844 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 KCNF1Q9H3M0 494 aa25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 HERC5Q9UII4 1024 aaKnown RBP25.57■■□□□ 1.68
PDLIM2-202ENST00000308354 COL2A1P02458 1487 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 GRAMD1CQ8IYS0 662 aa25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 MTMR14Q8NCE2 650 aa25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 PNMA6FA0A0J9YX94 578 aa25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 A0A1W2PRG0 241 aa25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 MYO1BO43795 1136 aa25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 MORC2Q9Y6X9 1032 aaPredicted RBP25.56■■□□□ 1.68
PDLIM2-202ENST00000308354 TNIP1Q15025 636 aa25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 DRC7Q8IY82 874 aa25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 C4orf32Q8N8J7 132 aa25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 ZBED3Q96IU2 234 aaPredicted RBP25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 GJA3Q9Y6H8 435 aa25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 SARM1Q6SZW1 724 aa25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 DHX58Q96C10 678 aa25.55■■□□□ 1.68
PDLIM2-202ENST00000308354 ECE1P42892 770 aa25.54■■□□□ 1.68
PDLIM2-202ENST00000308354 SPICE1Q8N0Z3 855 aa25.54■■□□□ 1.68
PDLIM2-202ENST00000308354 REXO1Q8N1G1 1221 aaKnown RBP25.54■■□□□ 1.68
PDLIM2-202ENST00000308354 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
PDLIM2-202ENST00000308354 NDUFB10O96000 172 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 PRR29P0C7W0 189 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 PTGS1P23219 599 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 NLRP12P59046 1061 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 MDM2Q00987 491 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 LETM2Q2VYF4 491 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 DCAF4Q8WV16 495 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 PCDHA5Q9Y5H7 936 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 ZBTB5O15062 677 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 TPM3P06753 285 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 CDC25AP30304 524 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 SNAP25P60880 206 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 NONOQ15233 471 aaKnown RBP eCLIP25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 KRT25Q7Z3Z0 450 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 FAM177A1Q8N128 213 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 C17orf53Q8N3J3 647 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 NRBP1Q9UHY1 535 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 TUBE1Q9UJT0 475 aa25.53■■□□□ 1.68
PDLIM2-202ENST00000308354 ACTN4O43707 911 aaKnown RBP25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 ESYT2A0FGR8 921 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 hCG_1984214I3L0E3 225 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 ADCY7P51828 1080 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 FKBP1CQ5VVH2 108 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 SAMD7Q7Z3H4 446 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 ZNF713Q8N859 430 aaPredicted RBP25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 ACER1Q8TDN7 264 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 TBCKQ8TEA7 893 aa25.52■■□□□ 1.68
PDLIM2-202ENST00000308354 CCNT1O60563 726 aaKnown RBP25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 GMPSP49915 693 aaPredicted RBP25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 CCDC186Q7Z3E2 898 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 BPIFA3Q9BQP9 254 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 IKQ13123 557 aaPredicted RBP25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 POSTNQ15063 836 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 UBE2SQ16763 222 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 QRICH1Q2TAL8 776 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 FAM83AQ86UY5 434 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 GMCL1P1Q8NEA9 526 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 MTMR8Q96EF0 704 aa25.51■■□□□ 1.67
PDLIM2-202ENST00000308354 ASTN2O75129 1339 aaPredicted RBP25.5■■□□□ 1.67
PDLIM2-202ENST00000308354 MICALL2Q8IY33 904 aa25.5■■□□□ 1.67
PDLIM2-202ENST00000308354 RASA3Q14644 834 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 TBC1D10BQ4KMP7 808 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 PGAP2Q9UHJ9 254 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 ZBTB21Q9ULJ3 1066 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 PYCARDQ9ULZ3 195 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 TMEM232C9JQI7 657 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 CDC25BP30305 580 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 AFMP43652 599 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 CDC37Q16543 378 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 ARL6IP4Q66PJ3 421 aaKnown RBP25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 NEK8Q86SG6 692 aa25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-202ENST00000308354 CASP1P29466 404 aa25.48■■□□□ 1.67
PDLIM2-202ENST00000308354 ZNF280AP59817 542 aaPredicted RBP25.48■■□□□ 1.67
PDLIM2-202ENST00000308354 KIAA1755Q5JYT7 1200 aa25.48■■□□□ 1.67
PDLIM2-202ENST00000308354 MRFAP1L1Q96HT8 127 aa25.48■■□□□ 1.67
PDLIM2-202ENST00000308354 GMCL1Q96IK5 515 aa25.48■■□□□ 1.67
PDLIM2-202ENST00000308354 HOOK1Q9UJC3 728 aaKnown RBP25.48■■□□□ 1.67
PDLIM2-202ENST00000308354 PP2D1A8MPX8 630 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 FZD9O00144 591 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 BMP3P12645 472 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 NOLC1Q14978 699 aaKnown RBP eCLIP25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 ZYXQ15942 572 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 DTHD1Q6ZMT9 781 aa25.47■■□□□ 1.67
PDLIM2-202ENST00000308354 STAMQ92783 540 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 212.9 ms