RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 NASPP49321 788 aaPredicted RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 TOB1P50616 345 aaPredicted RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 NLRP5P59047 1200 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 UBE2HP62256 183 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 CSPP1Q1MSJ5 1256 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 MTMR8Q96EF0 704 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 PGBD1Q96JS3 809 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ZNF341Q9BYN7 854 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 GZF1Q9H116 711 aaPredicted RBP8.01□□□□□ -1.13
PTCD2-201ENST00000308077 POLR3EQ9NVU0 708 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ZNF112Q9UJU3 913 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 RCOR1Q9UKL0 485 aa8.01□□□□□ -1.13
PTCD2-201ENST00000308077 ADM5C9JUS6 153 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 M0R2N6 131 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 CTNND1O60716 968 aaKnown RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 BMP3P12645 472 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 EPHX2P34913 555 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 ANO1Q5XXA6 986 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 DCAF15Q66K64 600 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 LINC00301Q8NCQ3 95 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 SEC63Q9UGP8 760 aaKnown RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 ISY1Q9ULR0 285 aaKnown RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 TMEM232C9JQI7 657 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 WNT7AO00755 349 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 MBD3O95983 291 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 PTPAQ15257 358 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 SF3A1Q15459 793 aaKnown RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 ZYXQ15942 572 aaKnown RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 CAVIN1Q6NZI2 390 aaKnown RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 DAGLBQ8NCG7 672 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 ZKSCAN4Q969J2 545 aaPredicted RBP8□□□□□ -1.13
PTCD2-201ENST00000308077 COA7Q96BR5 231 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 WRNIP1Q96S55 665 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 VCPKMTQ9H867 229 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 TMEM63CQ9P1W3 806 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 PCDHA4Q9UN74 947 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 HCN4Q9Y3Q4 1203 aa8□□□□□ -1.13
PTCD2-201ENST00000308077 PNMA6FA0A0J9YX94 578 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 ZBTB5O15062 677 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 YEATS4O95619 227 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 NAPAP54920 295 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 GSE1Q14687 1217 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 QRICH1Q2TAL8 776 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 FAM83BQ5T0W9 1011 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 BTNL9Q6UXG8 535 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 USP50Q70EL3 339 aaPredicted RBP7.99□□□□□ -1.13
PTCD2-201ENST00000308077 BLIDQ8IZY5 108 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 CCDC148Q8NFR7 591 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 RASGRP4Q8TDF6 673 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 DCPSQ96C86 337 aaKnown RBP7.99□□□□□ -1.13
PTCD2-201ENST00000308077 HOOK2Q96ED9 719 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 ZMYND12Q9H0C1 365 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 BRMS1Q9HCU9 246 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 GOPCQ9HD26 462 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 GINM1Q9NU53 330 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 RBBP6Q7Z6E9 1792 aaKnown RBP7.99□□□□□ -1.13
PTCD2-201ENST00000308077 PARP14Q460N5 1801 aa7.99□□□□□ -1.13
PTCD2-201ENST00000308077 hCG_1984214I3L0E3 225 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 USP2O75604 605 aaPredicted RBP7.98□□□□□ -1.13
PTCD2-201ENST00000308077 LIG1P18858 919 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 CALML3P27482 149 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SNAP25P60880 206 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PRKG1Q13976 671 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SLC39A14Q15043 492 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 STK38Q15208 465 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 CDC37Q16543 378 aaPredicted RBP7.98□□□□□ -1.13
PTCD2-201ENST00000308077 RILPL1Q5EBL4 403 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SYDE2Q5VT97 1194 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SCYL3Q8IZE3 742 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 FAM177A1Q8N128 213 aaPredicted RBP7.98□□□□□ -1.13
PTCD2-201ENST00000308077 ZNF713Q8N859 430 aaPredicted RBP7.98□□□□□ -1.13
PTCD2-201ENST00000308077 TAF1DQ9H5J8 278 aaPredicted RBP7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PCDHA7Q9UN72 937 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PCDHA6Q9UN73 950 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PCDHB6Q9Y5E3 794 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PCDHA8Q9Y5H6 950 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SMCHD1A6NHR9 2005 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 A0A1W2PPC1 479 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 ESYT2A0FGR8 921 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SMCO2A6NFE2 343 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SPTLC2O15270 562 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PTPRAP18433 802 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 MAP2K2P36507 400 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SUPT20HL1Q3ZLR7 823 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 PIK3AP1Q6ZUJ8 805 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 KRT26Q7Z3Y9 468 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SULF1Q8IWU6 871 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTCD2-201ENST00000308077 SH2D4AQ9H788 454 aa7.98□□□□□ -1.13
PTCD2-201ENST00000308077 TAL1P17542 331 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 ATP2B1P20020 1258 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 MARCKSP29966 332 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 STAT2P52630 851 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 IKQ13123 557 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 NOL9Q5SY16 702 aaKnown RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 AXDND1Q5T1B0 1012 aaPredicted RBP7.97□□□□□ -1.13
PTCD2-201ENST00000308077 GALNT17Q6IS24 598 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 KCNG4Q8TDN1 519 aa7.97□□□□□ -1.13
PTCD2-201ENST00000308077 ZC3H15Q8WU90 426 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms