RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 ICA1Q05084 483 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 GRIN1Q05586 938 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 RRP1BQ14684 758 aaKnown RBP13.57□□□□□ -0.24
TRIM40-205ENST00000307859 RBM26Q5T8P6 1007 aaKnown RBP13.57□□□□□ -0.24
TRIM40-205ENST00000307859 MAP1SQ66K74 1059 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-205ENST00000307859 HOMER1Q86YM7 354 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 GMCL1P1Q8NEA9 526 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 FERMT2Q96AC1 680 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 MTMR8Q96EF0 704 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 WNT10BO00744 389 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 MYO1BO43795 1136 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 TBC1D12O60347 775 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 GDF11O95390 407 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 JAG1P78504 1218 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 DGKZQ13574 1117 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 STX1AQ16623 288 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 ANO6Q4KMQ2 910 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 ELOA2Q8IYF1 753 aaPredicted RBP13.57□□□□□ -0.24
TRIM40-205ENST00000307859 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 JMJD4Q9H9V9 463 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
TRIM40-205ENST00000307859 C6orf50Q9HD87 102 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 PGAP2Q9UHJ9 254 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
TRIM40-205ENST00000307859 CCDC194A0A1B0GVG4 234 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 FZD9O00144 591 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 GH2P01242 217 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 GNA11P29992 359 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 ZNF174Q15697 407 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 PPP1R18Q6NYC8 613 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 ADGRF4Q8IZF3 695 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 RASGRP4Q8TDF6 673 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 VEZTQ9HBM0 779 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 VAT1LQ9HCJ6 419 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 FAM13BQ9NYF5 915 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 KIAA1468Q9P260 1216 aa13.56□□□□□ -0.24
TRIM40-205ENST00000307859 DOCK1Q14185 1865 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 MAP3K10Q02779 954 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 PTGDRQ13258 359 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 SLFN13Q68D06 897 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 PAXIP1Q6ZW49 1069 aaPredicted RBP13.55□□□□□ -0.24
TRIM40-205ENST00000307859 KRT25Q7Z3Z0 450 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 GMCL1Q96IK5 515 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 CSRNP2Q9H175 543 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
TRIM40-205ENST00000307859 ARL6IP4Q66PJ3 421 aaKnown RBP13.54□□□□□ -0.24
TRIM40-205ENST00000307859 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 KCTD1Q719H9 257 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 C4orf32Q8N8J7 132 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 DPF2Q92785 391 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 TMEM39BQ9GZU3 492 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 DNAJC25Q9H1X3 360 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
TRIM40-205ENST00000307859 F5H6K3 240 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 ZBTB5O15062 677 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 PPP1R11O60927 126 aaPredicted RBP13.53□□□□□ -0.24
TRIM40-205ENST00000307859 NDUFB10O96000 172 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 SLC1A4P43007 532 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 KLRC3Q07444 240 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 SPECC1Q5M775 1068 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 TUBE1Q9UJT0 475 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 TSKSQ9UJT2 592 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 ZBTB21Q9ULJ3 1066 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 POLR2AP24928 1970 aaKnown RBP13.53□□□□□ -0.24
TRIM40-205ENST00000307859 USP17L10C9JJH3 530 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 MCM7P33993 719 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 SLC16A2P36021 539 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 TNNI2P48788 182 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 ZNF165P49910 485 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 GMPSP49915 693 aaPredicted RBP13.53□□□□□ -0.24
TRIM40-205ENST00000307859 ADCY7P51828 1080 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM40-205ENST00000307859 INF2Q27J81 1249 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 LONRF3Q496Y0 759 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 C11orf57Q6ZUT1 292 aaPredicted RBP13.53□□□□□ -0.24
TRIM40-205ENST00000307859 CDAN1Q8IWY9 1227 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
TRIM40-205ENST00000307859 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
TRIM40-205ENST00000307859 PARP14Q460N5 1801 aa13.52□□□□□ -0.24
TRIM40-205ENST00000307859 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 EGFRP00533 1210 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 ORC2Q13416 577 aaPredicted RBP13.52□□□□□ -0.25
TRIM40-205ENST00000307859 TNFAIP1Q13829 316 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 USP49Q70CQ1 688 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 LUZP1Q86V48 1076 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 MICALL2Q8IY33 904 aa13.52□□□□□ -0.25
TRIM40-205ENST00000307859 CNNM3Q8NE01 707 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms