RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PP2D1A8MPX8 630 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 USP17L10C9JJH3 530 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 PSMD14O00487 310 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 RAD17O75943 681 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 VIL1P09327 827 aaKnown RBP7.44□□□□□ -1.22
USP47-201ENST00000305481 GNA11P29992 359 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 SEPT2Q15019 361 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 RSBN1LQ6PCB5 846 aaPredicted RBP7.44□□□□□ -1.22
USP47-201ENST00000305481 MTMR8Q96EF0 704 aa7.44□□□□□ -1.22
USP47-201ENST00000305481 PNMA6FA0A0J9YX94 578 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 SPDYE2BA6NHP3 402 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 ENTPD3O75355 529 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 SPDYE6P0CI01 402 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 FANCCQ00597 558 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 NONOQ15233 471 aaKnown RBP eCLIP7.43□□□□□ -1.22
USP47-201ENST00000305481 NAALADL2Q58DX5 795 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 JAKMIP3Q5VZ66 844 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 TRIML1Q8N9V2 468 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 MLKLQ8NB16 471 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 LRRC15Q8TF66 581 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 DPF2Q92785 391 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 ZBTB12Q9Y330 459 aaPredicted RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 GDF11O95390 407 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 KARSQ15046 597 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 LETM2Q2VYF4 491 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 GRIPAP1Q4V328 841 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 GPATCH4Q5T3I0 446 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 LRRC8AQ8IWT6 810 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 REXO1Q8N1G1 1221 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 IQUBQ8NA54 791 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 TBCKQ8TEA7 893 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 KANSL2Q9H9L4 492 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 NYAP2Q9P242 653 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 hCG_1984214I3L0E3 225 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 CCNT1O60563 726 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 PRPHP41219 470 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 SOGA3Q5TF21 947 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 TRMT44Q8IYL2 757 aaKnown RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 ZNF713Q8N859 430 aaPredicted RBP7.43□□□□□ -1.22
USP47-201ENST00000305481 SLC16A10Q8TF71 515 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 BLZF1Q9H2G9 400 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 KIF13BQ9NQT8 1826 aa7.43□□□□□ -1.22
USP47-201ENST00000305481 SMC2O95347 1197 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 ZNF18P17022 549 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 CUL4BQ13620 913 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 CCDC96Q2M329 555 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 FILIP1Q7Z7B0 1213 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 NEK8Q86SG6 692 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 NAP1L5Q96NT1 182 aaPredicted RBP7.42□□□□□ -1.22
USP47-201ENST00000305481 GSDMAQ96QA5 445 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 CLRN2A0PK11 232 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 TCP10L2B9ZVM9 353 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 LAD1O00515 517 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 ZBTB5O15062 677 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
USP47-201ENST00000305481 ADCY7P51828 1080 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 ABCB5Q2M3G0 1257 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 HSP90AA4PQ58FG1 418 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.42□□□□□ -1.22
USP47-201ENST00000305481 TMEM179Q6ZVK1 233 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
USP47-201ENST00000305481 ENOX1Q8TC92 643 aaKnown RBP7.42□□□□□ -1.22
USP47-201ENST00000305481 CSRNP1Q96S65 589 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 RIC8AQ9NPQ8 531 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 DISC1Q9NRI5 854 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 INTS13Q9NVM9 706 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
USP47-201ENST00000305481 COL2A1P02458 1487 aaPredicted RBP7.42□□□□□ -1.22
USP47-201ENST00000305481 A0A1W2PRG0 241 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 PPP1R3GB7ZBB8 358 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 TPM4P67936 248 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 ICA1Q05084 483 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 UBE2SQ16763 222 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 SLFN13Q68D06 897 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 CDAN1Q8IWY9 1227 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 MTMR9Q96QG7 549 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 ZNF70Q9UC06 446 aaPredicted RBP7.41□□□□□ -1.22
USP47-201ENST00000305481 NFE2L3Q9Y4A8 694 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 NEMFO60524 1076 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 ZBTB7AO95365 584 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 GH2P01242 217 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 OR52Z1P0C646 297 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 CCZ1BP86790 482 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 CCZ1P86791 482 aaPredicted RBP7.41□□□□□ -1.22
USP47-201ENST00000305481 PTPN21Q16825 1174 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 POTEDQ86YR6 584 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 PLIN2Q99541 437 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 NUP88Q99567 741 aaPredicted RBP7.41□□□□□ -1.22
USP47-201ENST00000305481 CCSER1Q9C0I3 900 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 SAMSN1Q9NSI8 373 aaKnown RBP7.41□□□□□ -1.22
USP47-201ENST00000305481 TMEM232C9JQI7 657 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 F5H6K3 240 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 GTPBP6O43824 516 aaPredicted RBP7.41□□□□□ -1.22
USP47-201ENST00000305481 SLC37A4O43826 429 aa7.41□□□□□ -1.22
USP47-201ENST00000305481 RAD21O60216 631 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms