RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 KIAA1024Q9UPX6 916 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 USP17L8P0C7I0 530 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 ATF7P17544 494 aaPredicted RBP11.18□□□□□ -0.62
PRPF8-201ENST00000304992 ROBO2Q9HCK4 1378 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 CCDC121Q6ZUS5 278 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 KRT26Q7Z3Y9 468 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 TRIM50Q86XT4 487 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 VPS52Q8N1B4 723 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 ZNF274Q96GC6 653 aaPredicted RBP11.18□□□□□ -0.62
PRPF8-201ENST00000304992 DISC1Q9NRI5 854 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 ERBB4Q15303 1308 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 CYP2D7A0A087X1C5 515 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 STAT1P42224 750 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 ADKP55263 362 aaKnown RBP11.18□□□□□ -0.62
PRPF8-201ENST00000304992 PTGDRQ13258 359 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 SAMD15Q9P1V8 674 aa11.18□□□□□ -0.62
PRPF8-201ENST00000304992 USP17L3A6NCW0 530 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 USP17L4A6NCW7 530 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 USP17L1Q7RTZ2 530 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 HESX1Q9UBX0 185 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 SERPINB13Q9UIV8 391 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 RABGAP1Q9Y3P9 1069 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 AFF2P51816 1311 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 ABCC4O15439 1325 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 PIK3CAP42336 1068 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 PALLDQ8WX93 1383 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 NPC1L1Q9UHC9 1359 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 DDAH1O94760 285 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 ODR4Q5SWX8 454 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 FAM135BQ49AJ0 1406 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 TBC1D8O95759 1140 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 USP14P54578 494 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 CCDC17Q96LX7 622 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 HAUS2Q9NVX0 235 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 LARSQ9P2J5 1176 aaKnown RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 HNRNPDLO14979 420 aaKnown RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 STAM2O75886 525 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 CACNB1Q02641 598 aaPredicted RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 COA7Q96BR5 231 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 USP28Q96RU2 1077 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 ARMCX3Q9UH62 379 aaPredicted RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 MARK3P27448 753 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 IREB2P48200 963 aaKnown RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 VPS41P49754 854 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 LACTBP83111 547 aaPredicted RBP11.17□□□□□ -0.62
PRPF8-201ENST00000304992 SETDB1Q15047 1291 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 RPS6KA1Q15418 735 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 SND1Q7KZF4 910 aaKnown RBP eCLIP11.17□□□□□ -0.624e-7■□□□□ 9.7
PRPF8-201ENST00000304992 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
PRPF8-201ENST00000304992 TLR3O15455 904 aaKnown RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 FMNL1O95466 1100 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 STAT2P52630 851 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 CUL4BQ13620 913 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 SUSD4Q5VX71 490 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 CCDC84Q86UT8 332 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 LCORLQ8N3X6 602 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 KCNJ18B7U540 433 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 NPR1P16066 1061 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 SLC12A2P55011 1212 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 UBE3CQ15386 1083 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 C17orf53Q8N3J3 647 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.622e-7■□□□□ 10.5
PRPF8-201ENST00000304992 ADCY9O60503 1353 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 ERBB3P21860 1342 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 MORC3Q14149 939 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 NKX1-1Q15270 411 aaPredicted RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 ADAT2Q7Z6V5 191 aaKnown RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 NME8Q8N427 588 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 RABEP2Q9H5N1 569 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 MNAT1P51948 309 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 OSTNP61366 133 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 RSPH3Q86UC2 560 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 MEIS1O00470 390 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 TUBB4AP04350 444 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 BMP3P12645 472 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 KIAA1841Q6NSI8 718 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 PIM2Q9P1W9 311 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 COL4A3BPQ9Y5P4 624 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 GNA14O95837 355 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 ZNF75DP51815 510 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 SPATA24Q86W54 205 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 PIGSQ96S52 555 aa11.16□□□□□ -0.62
PRPF8-201ENST00000304992 ADD3Q9UEY8 706 aaKnown RBP11.16□□□□□ -0.62
PRPF8-201ENST00000304992 TSTA3Q13630 321 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-201ENST00000304992 PSMD6Q15008 389 aa11.15□□□□□ -0.62
PRPF8-201ENST00000304992 INTS8Q75QN2 995 aaKnown RBP11.15□□□□□ -0.62
PRPF8-201ENST00000304992 BRINP3Q76B58 766 aa11.15□□□□□ -0.62
PRPF8-201ENST00000304992 CTAGE3PQ8IX95 158 aa11.15□□□□□ -0.62
PRPF8-201ENST00000304992 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
PRPF8-201ENST00000304992 VPS37BQ9H9H4 285 aa11.15□□□□□ -0.62
PRPF8-201ENST00000304992 BLMP54132 1417 aaPredicted RBP11.15□□□□□ -0.62
PRPF8-201ENST00000304992 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.15□□□□□ -0.621e-6■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms