RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 FRMPD3Q5JV73 1810 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 FRMPD2Q68DX3 1309 aaPredicted RBP31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 COL6A1P12109 1028 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 SYDE2Q5VT97 1194 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 ZSCAN10Q96SZ4 725 aaPredicted RBP31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 GPCPD1Q9NPB8 672 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 RNF146Q9NTX7 359 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 ZSWIM5Q9P217 1185 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 CNPY2Q9Y2B0 182 aa31.05■■■□□ 2.56
CDKN2A-201ENST00000304494 SYNGAP1Q96PV0 1343 aa31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 SGSM2O43147 1006 aa31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 SNHG28P0DPA3 235 aa31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 SLC16A2P36021 539 aa31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 TTBK2Q6IQ55 1244 aa31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 ARRDC4Q8NCT1 418 aa31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 RANBP17Q9H2T7 1088 aaKnown RBP31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 U3KPZ7 1027 aaPredicted RBP31.04■■■□□ 2.56
CDKN2A-201ENST00000304494 PFASO15067 1338 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 DNM1LO00429 736 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 ICAM1P05362 532 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 ALAS1P13196 640 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 SNAP25P60880 206 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 ZNF543Q08ER8 600 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 GPATCH4Q5T3I0 446 aaKnown RBP31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 MAMDC4Q6UXC1 1216 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 ANKS1AQ92625 1134 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 TRERF1Q96PN7 1200 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 UBAC1Q9BSL1 405 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 KAT14Q9H8E8 782 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 CCPG1Q9ULG6 757 aa31.03■■■□□ 2.56
CDKN2A-201ENST00000304494 TRDNQ13061 729 aa31.02■■■□□ 2.56
CDKN2A-201ENST00000304494 PNMA1Q8ND90 353 aa31.02■■■□□ 2.56
CDKN2A-201ENST00000304494 PTH1RQ03431 593 aa31.01■■■□□ 2.55
CDKN2A-201ENST00000304494 ENAHQ8N8S7 591 aaPredicted RBP31.01■■■□□ 2.55
CDKN2A-201ENST00000304494 PNMA2Q9UL42 364 aa31.01■■■□□ 2.55
CDKN2A-201ENST00000304494 TNKSO95271 1327 aa31■■■□□ 2.55
CDKN2A-201ENST00000304494 A1CFQ9NQ94 594 aaKnown RBP31■■■□□ 2.55
CDKN2A-201ENST00000304494 POTEB2H3BUK9 544 aa30.99■■■□□ 2.55
CDKN2A-201ENST00000304494 RARBP10826 455 aa30.99■■■□□ 2.55
CDKN2A-201ENST00000304494 AKR1A1P14550 325 aa30.99■■■□□ 2.55
CDKN2A-201ENST00000304494 ANO1Q5XXA6 986 aa30.99■■■□□ 2.55
CDKN2A-201ENST00000304494 KBTBD13C9JR72 458 aa30.98■■■□□ 2.55
CDKN2A-201ENST00000304494 CYP21A2P08686 494 aa30.98■■■□□ 2.55
CDKN2A-201ENST00000304494 ZNF865P0CJ78 1059 aaPredicted RBP30.98■■■□□ 2.55
CDKN2A-201ENST00000304494 C7orf61Q8IZ16 206 aa30.98■■■□□ 2.55
CDKN2A-201ENST00000304494 TAL1P17542 331 aaPredicted RBP30.97■■■□□ 2.55
CDKN2A-201ENST00000304494 GJC2Q5T442 439 aaPredicted RBP30.97■■■□□ 2.55
CDKN2A-201ENST00000304494 FAM133AQ8N9E0 248 aa30.97■■■□□ 2.55
CDKN2A-201ENST00000304494 SENP6Q9GZR1 1112 aaPredicted RBP30.97■■■□□ 2.55
CDKN2A-201ENST00000304494 COLQQ9Y215 455 aaPredicted RBP30.97■■■□□ 2.55
CDKN2A-201ENST00000304494 SNAI1O95863 264 aaPredicted RBP30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 MUM1L1Q5H9M0 696 aa30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 IFIT1BQ5T764 474 aaKnown RBP30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 KIAA1211Q6ZU35 1233 aa30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 MAP4K1Q92918 833 aa30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 FGD4Q96M96 766 aa30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 XPNPEP3Q9NQH7 507 aa30.96■■■□□ 2.55
CDKN2A-201ENST00000304494 ALPK3Q96L96 1907 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 GOLGA8HP0CJ92 632 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 CNTN2Q02246 1040 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 ASPRV1Q53RT3 343 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 BMP2KLQ5H9B9 411 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 HABP4Q5JVS0 413 aaKnown RBP30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 ABHD16BQ9H3Z7 469 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 CYP39A1Q9NYL5 469 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 ZHX1Q9UKY1 873 aaPredicted RBP30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 FAM184BQ9ULE4 1060 aa30.95■■■□□ 2.55
CDKN2A-201ENST00000304494 MYCNP04198 464 aaPredicted RBP30.94■■■□□ 2.54
CDKN2A-201ENST00000304494 CHRDL2Q6WN34 429 aa30.94■■■□□ 2.54
CDKN2A-201ENST00000304494 ARMCX2Q7L311 632 aa30.94■■■□□ 2.54
CDKN2A-201ENST00000304494 RALYLQ86SE5 291 aaKnown RBP30.94■■■□□ 2.54
CDKN2A-201ENST00000304494 ASB14A6NK59 587 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 ACVR2BQ13705 512 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 LRRC41Q15345 812 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 LRRC26Q2I0M4 334 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 NSMFQ6X4W1 530 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 RNF180Q86T96 592 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 NCOA7Q8NI08 942 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 WDR19Q8NEZ3 1342 aa30.93■■■□□ 2.54
CDKN2A-201ENST00000304494 E7EWF7 191 aa30.92■■■□□ 2.54
CDKN2A-201ENST00000304494 CYB5R4Q7L1T6 521 aa30.92■■■□□ 2.54
CDKN2A-201ENST00000304494 CCDC144CPQ8IYA2 1237 aa30.92■■■□□ 2.54
CDKN2A-201ENST00000304494 RBM8AQ9Y5S9 174 aaKnown RBP30.92■■■□□ 2.54
CDKN2A-201ENST00000304494 PARP1P09874 1014 aaKnown RBP30.91■■■□□ 2.54
CDKN2A-201ENST00000304494 SEC23AQ15436 765 aa30.91■■■□□ 2.54
CDKN2A-201ENST00000304494 CCDC136Q96JN2 1154 aa30.91■■■□□ 2.54
CDKN2A-201ENST00000304494 ESYT1Q9BSJ8 1104 aa30.91■■■□□ 2.54
CDKN2A-201ENST00000304494 UBA5Q9GZZ9 404 aa30.91■■■□□ 2.54
CDKN2A-201ENST00000304494 ERICH2A1L162 156 aa30.9■■■□□ 2.54
CDKN2A-201ENST00000304494 SOWAHBA6NEL2 793 aa30.9■■■□□ 2.54
CDKN2A-201ENST00000304494 SART3Q15020 963 aaKnown RBP30.9■■■□□ 2.54
CDKN2A-201ENST00000304494 PGK1P00558 417 aa30.89■■■□□ 2.54
CDKN2A-201ENST00000304494 NFIBO00712 420 aa30.88■■■□□ 2.53
CDKN2A-201ENST00000304494 SKAP1Q86WV1 359 aa30.88■■■□□ 2.53
CDKN2A-201ENST00000304494 ADGRF4Q8IZF3 695 aa30.88■■■□□ 2.53
CDKN2A-201ENST00000304494 ADD3Q9UEY8 706 aaKnown RBP30.88■■■□□ 2.53
CDKN2A-201ENST00000304494 ZMYND8Q9ULU4 1186 aaPredicted RBP30.88■■■□□ 2.53
CDKN2A-201ENST00000304494 CEP290O15078 2479 aa30.88■■■□□ 2.53
CDKN2A-201ENST00000304494 IFIT3O14879 490 aaKnown RBP30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms