RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCDC7-202ENST00000302316 LPAR1Q92633 364 aa14.87□□□□□ -0.03
CCDC7-202ENST00000302316 PRR12Q9ULL5 1215 aa14.87□□□□□ -0.03
CCDC7-202ENST00000302316 TRAPPC10P48553 1259 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 SNAP25P60880 206 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 TTC38Q5R3I4 469 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 NOL9Q5SY16 702 aaKnown RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 REXO1Q8N1G1 1221 aaKnown RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 CHURC1Q8WUH1 139 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 WDR18Q9BV38 432 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 WDR46O15213 610 aaKnown RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 PPP1R12BO60237 982 aaPredicted RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 USP2O75604 605 aaPredicted RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 SPP2Q13103 211 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 ADALQ6DHV7 355 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 KRT25Q7Z3Z0 450 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 PNMA8AQ86V59 439 aaPredicted RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 FAM160B2Q86V87 743 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 CCAR1Q8IX12 1150 aaKnown RBP14.86□□□□□ -0.03
CCDC7-202ENST00000302316 KIFC2Q96AC6 838 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 AMNQ9BXJ7 453 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 FEM1BQ9UK73 627 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 PCDHA1Q9Y5I3 950 aa14.86□□□□□ -0.03
CCDC7-202ENST00000302316 POTECB2RU33 542 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 PLA2G6O60733 806 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 USP14P54578 494 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 DGKZQ13574 1117 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 CCDC183Q5T5S1 534 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
CCDC7-202ENST00000302316 FBXO11Q86XK2 927 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 ZNF280CQ8ND82 737 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 CUL5Q93034 780 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 CDCA5Q96FF9 252 aa14.85□□□□□ -0.03
CCDC7-202ENST00000302316 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.85□□□□□ -0.03
CCDC7-202ENST00000302316 A0A1W2PQ27 194 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 A0A1W2PQ64 194 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 A0A1W2PQD8 194 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 WNT7AO00755 349 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 NF2P35240 595 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 USH1GQ495M9 461 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 CCDC73Q6ZRK6 1079 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 FSIP1Q8NA03 581 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 MRPS27Q92552 414 aaKnown RBP14.84□□□□□ -0.03
CCDC7-202ENST00000302316 RIC8AQ9NPQ8 531 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 DACT1Q9NYF0 836 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 BIN2Q9UBW5 565 aaPredicted RBP14.84□□□□□ -0.03
CCDC7-202ENST00000302316 ZHX2Q9Y6X8 837 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 BMP15O95972 392 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 BACE1P56817 501 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 MAP3K9P80192 1104 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 NONOQ15233 471 aaKnown RBP eCLIP14.84□□□□□ -0.03
CCDC7-202ENST00000302316 ZNF174Q15697 407 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 INF2Q27J81 1249 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 JAKMIP3Q5VZ66 844 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 GOLPH3LQ9H4A5 285 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
CCDC7-202ENST00000302316 NR1I2O75469 434 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 VCAM1P19320 739 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 IREB2P48200 963 aaKnown RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 MRPL12P52815 198 aaKnown RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 VGLL4Q14135 290 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 AXDND1Q5T1B0 1012 aaPredicted RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 KRI1Q8N9T8 703 aaKnown RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 TANGO6Q9C0B7 1094 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 RANBP17Q9H2T7 1088 aaKnown RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 PSTPIP2Q9H939 334 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 TMEM260Q9NX78 707 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 CSADQ9Y600 493 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 PAPPA2Q9BXP8 1791 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 OTOFQ9HC10 1997 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 PHIPQ8WWQ0 1821 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 UBE2SQ16763 222 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 CCDC174Q6PII3 467 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.83□□□□□ -0.04
CCDC7-202ENST00000302316 GLT8D2Q9H1C3 349 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 SNCAIPQ9Y6H5 919 aa14.83□□□□□ -0.04
CCDC7-202ENST00000302316 SYCE3A1L190 88 aa14.82□□□□□ -0.04
CCDC7-202ENST00000302316 CUTAO60888 179 aa14.82□□□□□ -0.04
CCDC7-202ENST00000302316 MCM7P33993 719 aa14.82□□□□□ -0.04
CCDC7-202ENST00000302316 TTLL12Q14166 644 aaPredicted RBP14.82□□□□□ -0.04
CCDC7-202ENST00000302316 CLIC6Q96NY7 704 aa14.82□□□□□ -0.04
CCDC7-202ENST00000302316 SLF1Q9BQI6 1058 aa14.82□□□□□ -0.04
CCDC7-202ENST00000302316 NUP62CLQ9H1M0 184 aa14.82□□□□□ -0.04
CCDC7-202ENST00000302316 FBXO2Q9UK22 296 aaPredicted RBP14.82□□□□□ -0.04
CCDC7-202ENST00000302316 A0A1B0GVL5 298 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 TAL1P17542 331 aaPredicted RBP14.81□□□□□ -0.04
CCDC7-202ENST00000302316 PTPREP23469 700 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 HMGCS2P54868 508 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 ZNF445P59923 1031 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 FAM160A1Q05DH4 1040 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 TRAF1Q13077 416 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
CCDC7-202ENST00000302316 MRVI1Q9Y6F6 885 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 MORC2Q9Y6X9 1032 aaPredicted RBP14.81□□□□□ -0.04
CCDC7-202ENST00000302316 CMA1P23946 247 aa14.81□□□□□ -0.04
CCDC7-202ENST00000302316 CLK2P49760 499 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms