RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 TTC26A0AVF1 554 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 GTPBP6O43824 516 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 HEXIM1O94992 359 aaKnown RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 FTCDO95954 541 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 KLHL30Q0D2K2 578 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 NCAPHQ15003 741 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 ZNF526Q8TF50 670 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 NFU1Q9UMS0 254 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 GOLGA8KD6RF30 607 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 ECM2O94769 699 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 GOLGA8HP0CJ92 632 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 EIF6P56537 245 aaKnown RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 KRT26Q7Z3Y9 468 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 CABP7Q86V35 215 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 MB21D2Q8IYB1 491 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 LPIN2Q92539 896 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 ACSBG1Q96GR2 724 aa13.47□□□□□ -0.25
PDGFD-201ENST00000302251 NHEJ1Q9H9Q4 299 aaPredicted RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 PIH1D3Q9NQM4 214 aaKnown RBP13.47□□□□□ -0.25
PDGFD-201ENST00000302251 USP42Q9H9J4 1324 aaKnown RBP13.46□□□□□ -0.25
PDGFD-201ENST00000302251 BACH1O14867 736 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 LLGL1Q15334 1064 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 RPS6KA1Q15418 735 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 TRIM65Q6PJ69 517 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 RSRC1Q96IZ7 334 aaKnown RBP13.46□□□□□ -0.25
PDGFD-201ENST00000302251 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
PDGFD-201ENST00000302251 ADD2P35612 726 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 IFI16Q16666 785 aaKnown RBP13.46□□□□□ -0.25
PDGFD-201ENST00000302251 CRACR2BQ8N4Y2 399 aaPredicted RBP13.46□□□□□ -0.25
PDGFD-201ENST00000302251 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
PDGFD-201ENST00000302251 STK38LQ9Y2H1 464 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
PDGFD-201ENST00000302251 MCAMP43121 646 aa13.46□□□□□ -0.26
PDGFD-201ENST00000302251 RBM5P52756 815 aaKnown RBP eCLIP13.46□□□□□ -0.26
PDGFD-201ENST00000302251 MICAL1Q8TDZ2 1067 aa13.46□□□□□ -0.26
PDGFD-201ENST00000302251 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.26
PDGFD-201ENST00000302251 TCP1P17987 556 aaKnown RBP13.45□□□□□ -0.26
PDGFD-201ENST00000302251 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
PDGFD-201ENST00000302251 IFNAR2P48551 515 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 MCTP2Q6DN12 878 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 MRRFQ96E11 262 aaKnown RBP13.45□□□□□ -0.26
PDGFD-201ENST00000302251 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
PDGFD-201ENST00000302251 C6orf50Q9HD87 102 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.45□□□□□ -0.26
PDGFD-201ENST00000302251 SMARCAL1Q9NZC9 954 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 MYO1AQ9UBC5 1043 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 RIPOR2Q9Y4F9 1068 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 LMO7Q8WWI1 1683 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 GYG1P46976 350 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 PLS1Q14651 629 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 LRRC41Q15345 812 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 TAOK3Q9H2K8 898 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 TFCP2L1Q9NZI6 479 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 PDE6BP35913 854 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 CNNM4Q6P4Q7 775 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 NEDD4P46934 1319 aa13.45□□□□□ -0.26
PDGFD-201ENST00000302251 NCK2O43639 380 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 TFAP4Q01664 338 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 HERC4Q5GLZ8 1057 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 BEND6Q5SZJ8 279 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 GIGYF2Q6Y7W6 1299 aaKnown RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 ZNF142P52746 1687 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 A0A0U1RQJ8 604 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 A0A1W2PRG0 241 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 EIF4A3P38919 411 aaKnown RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 POLR2FP61218 127 aaKnown RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 CCDC84Q86UT8 332 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 LCORLQ8N3X6 602 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 F8W031 263 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 PDE8BO95263 885 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 PLEKHA8P1O95397 391 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 GNAQP50148 359 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 FOXP4Q8IVH2 680 aaPredicted RBP13.44□□□□□ -0.26
PDGFD-201ENST00000302251 CACNA2D3Q8IZS8 1091 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 COG1Q8WTW3 980 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 LRRC45Q96CN5 670 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 ODF2LQ9ULJ1 636 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 ABCB4P21439 1286 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 PRCPP42785 496 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 KCNJ6P48051 423 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 USP14P54578 494 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 SFMBT2Q5VUG0 894 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 RUFY4Q6ZNE9 571 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 KCNB2Q92953 911 aa13.44□□□□□ -0.26
PDGFD-201ENST00000302251 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
PDGFD-201ENST00000302251 GJC1P36383 396 aa13.43□□□□□ -0.26
PDGFD-201ENST00000302251 SF3B2Q13435 895 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms