RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
TPM3-202ENST00000302206 FRMPD2Q68DX3 1309 aaPredicted RBP13.69□□□□□ -0.22
TPM3-202ENST00000302206 CLRN2A0PK11 232 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 FZD9O00144 591 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 TNNI2P48788 182 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 MAP2K1Q02750 393 aaPredicted RBP13.69□□□□□ -0.22
TPM3-202ENST00000302206 SEPT2Q15019 361 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 SLFN13Q68D06 897 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 UBA5Q9GZZ9 404 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 GLT8D2Q9H1C3 349 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 JMJD4Q9H9V9 463 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 GPCPD1Q9NPB8 672 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 KIAA1468Q9P260 1216 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 PGAP2Q9UHJ9 254 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 USP25Q9UHP3 1055 aa13.69□□□□□ -0.22
TPM3-202ENST00000302206 HOOK1Q9UJC3 728 aaKnown RBP13.69□□□□□ -0.22
TPM3-202ENST00000302206 SMCO2A6NFE2 343 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 LAD1O00515 517 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 WNT10BO00744 389 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 ATP2B1P20020 1258 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 ATP2B2Q01814 1243 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 TNFAIP1Q13829 316 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 ZNF174Q15697 407 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 CCDC96Q2M329 555 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 ANO6Q4KMQ2 910 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 NOM1Q5C9Z4 860 aaKnown RBP13.68□□□□□ -0.22
TPM3-202ENST00000302206 KRBA2Q6ZNG9 492 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 PYM1Q9BRP8 204 aaKnown RBP13.68□□□□□ -0.22
TPM3-202ENST00000302206 CPVLQ9H3G5 476 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 VAT1LQ9HCJ6 419 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 GINM1Q9NU53 330 aa13.68□□□□□ -0.22
TPM3-202ENST00000302206 BAZ2BQ9UIF8 2168 aaKnown RBP13.68□□□□□ -0.22
TPM3-202ENST00000302206 ZBTB5O15062 677 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 ADAMTS3O15072 1205 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 GH2P01242 217 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 SLURP2P0DP57 97 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 PRPHP41219 470 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 RGS19P49795 217 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 PTGDRQ13258 359 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 NONOQ15233 471 aaKnown RBP eCLIP13.67□□□□□ -0.22
TPM3-202ENST00000302206 DEFB115Q30KQ5 88 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 BTNL9Q6UXG8 535 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 TEX2Q8IWB9 1127 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 C4orf32Q8N8J7 132 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 CCDC34Q96HJ3 373 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
TPM3-202ENST00000302206 CSRNP2Q9H175 543 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 TAF1DQ9H5J8 278 aaPredicted RBP13.67□□□□□ -0.22
TPM3-202ENST00000302206 VEZTQ9HBM0 779 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 CBX8Q9HC52 389 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 ARHGEF10LQ9HCE6 1279 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
TPM3-202ENST00000302206 RASSF10A6NK89 507 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 F5H6K3 240 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 WNT7AO00755 349 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 GDF11O95390 407 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 LONP1P36776 959 aaKnown RBP13.66□□□□□ -0.22
TPM3-202ENST00000302206 SLC1A4P43007 532 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 ZNF165P49910 485 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 ADCY7P51828 1080 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 NLRP12P59046 1061 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 KLRC3Q07444 240 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 RRP1BQ14684 758 aaKnown RBP13.66□□□□□ -0.22
TPM3-202ENST00000302206 EAPPQ56P03 285 aaPredicted RBP13.66□□□□□ -0.22
TPM3-202ENST00000302206 MCTP2Q6DN12 878 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 TTBK2Q6IQ55 1244 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
TPM3-202ENST00000302206 BPIFA3Q9BQP9 254 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 RIC8AQ9NPQ8 531 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 ZBTB21Q9ULJ3 1066 aa13.66□□□□□ -0.22
TPM3-202ENST00000302206 ITGBL1O95965 494 aaPredicted RBP13.65□□□□□ -0.22
TPM3-202ENST00000302206 NDUFB10O96000 172 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 GMPSP49915 693 aaPredicted RBP13.65□□□□□ -0.22
TPM3-202ENST00000302206 JAG1P78504 1218 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 GRIN1Q05586 938 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 ZRSR1Q15695 479 aaKnown RBP13.65□□□□□ -0.22
TPM3-202ENST00000302206 NBPF9Q3BBW0 867 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 LONRF3Q496Y0 759 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 KCTD1Q719H9 257 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 CEP57L1Q8IYX8 460 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 RASGRP4Q8TDF6 673 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 TRIM44Q96DX7 344 aaPredicted RBP13.65□□□□□ -0.22
TPM3-202ENST00000302206 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
TPM3-202ENST00000302206 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 DNAJC25Q9H1X3 360 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 TMX2Q9Y320 296 aa13.65□□□□□ -0.22
TPM3-202ENST00000302206 USP17L10C9JJH3 530 aa13.64□□□□□ -0.23
TPM3-202ENST00000302206 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
TPM3-202ENST00000302206 ACTN4O43707 911 aaKnown RBP13.64□□□□□ -0.23
TPM3-202ENST00000302206 PLA2G6O60733 806 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms