RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 TDO2P48775 406 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
ZNF558-201ENST00000301475 NPY5RQ15761 445 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 IL17AQ16552 155 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 TSR1Q2NL82 804 aaKnown RBP12.14□□□□□ -0.47
ZNF558-201ENST00000301475 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 BANK1Q8NDB2 785 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 ARMT1Q9H993 441 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 FBXO3Q9UK99 471 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 H7C1D1 291 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 VAV2P52735 878 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 ITIH3Q06033 890 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 TTC38Q5R3I4 469 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 ALS2CLQ60I27 953 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 TNFRSF25Q93038 417 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 CAVIN3Q969G5 261 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 PAGR1Q9BTK6 254 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 RNF26Q9BY78 433 aaPredicted RBP12.14□□□□□ -0.47
ZNF558-201ENST00000301475 CNNM2Q9H8M5 875 aa12.14□□□□□ -0.47
ZNF558-201ENST00000301475 ZNF233A6NK53 670 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 PATL2C9JE40 543 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 C21orf2O43822 256 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 TRIM21P19474 475 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 SEC24CP53992 1094 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 CABP4P57796 275 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 HDLBPQ00341 1268 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 ADSSL1Q8N142 457 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 ZNF473Q8WTR7 871 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 RUBCNQ92622 972 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 FAM89AQ96GI7 184 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 KRT23Q9C075 422 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 RIPOR2Q9Y4F9 1068 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 GSG1L2A8MUP6 293 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 KIF1CO43896 1103 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 IPO7O95373 1038 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 SRGNP10124 158 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 KIF5AQ12840 1032 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 KDM7AQ6ZMT4 941 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 SYNE4Q8N205 404 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 OSBPL9Q96SU4 736 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 EPN3Q9H201 632 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 VCPKMTQ9H867 229 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 MCM8Q9UJA3 840 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 SOS2Q07890 1332 aaPredicted RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 ZSCAN5CA6NGD5 496 aaPredicted RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 NKRFO15226 690 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 MOCS3O95396 460 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 FAM153BP0C7A2 387 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 FUT2Q10981 343 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 IFIT5Q13325 482 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 FAM153CQ494X1 144 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC13Q8IYE1 715 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC170Q8IYT3 715 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 TRIM58Q8NG06 486 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 TTLL11Q8NHH1 800 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 FAM212AQ96EL1 285 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 ISCA1Q9BUE6 129 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 FAM153AQ9UHL3 310 aa12.13□□□□□ -0.47
ZNF558-201ENST00000301475 CHUKO15111 745 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 RASSF9O75901 435 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 BMP15O95972 392 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 SCP2P22307 547 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 PTGISQ16647 500 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC96Q2M329 555 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 CCDC43Q96MW1 224 aaKnown RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 KLC4Q9NSK0 619 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 RBM12Q9NTZ6 932 aaKnown RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 ALS2Q96Q42 1657 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 TNS3Q68CZ2 1445 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 STRCQ7RTU9 1775 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 ESYT3A0FGR9 886 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 NCK2O43639 380 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 PPP1R37O75864 691 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 PLEKHA8P1O95397 391 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 RPAINQ86UA6 219 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 SPATS2Q86XZ4 545 aaKnown RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 IQCKQ8N0W5 287 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 MAGEB6Q8N7X4 407 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 PIK3R5Q8WYR1 880 aa12.12□□□□□ -0.47
ZNF558-201ENST00000301475 ZNF512BQ96KM6 892 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-201ENST00000301475 ADAMTS3O15072 1205 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 NR1D1P20393 614 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 TNFRSF8P28908 595 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
ZNF558-201ENST00000301475 DNM2P50570 870 aa12.11□□□□□ -0.47
ZNF558-201ENST00000301475 ZBED6P86452 979 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms