RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 MCM7P33993 719 aa16.26■□□□□ 0.19
C9orf3-202ENST00000297979 KRT25Q7Z3Z0 450 aa16.26■□□□□ 0.19
C9orf3-202ENST00000297979 ERCC4Q92889 916 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-202ENST00000297979 SLC16A2P36021 539 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 CBX8Q9HC52 389 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 FZD9O00144 591 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 TBC1D12O60347 775 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 ZNF165P49910 485 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 KRBA2Q6ZNG9 492 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 MTMR8Q96EF0 704 aa16.25■□□□□ 0.19
C9orf3-202ENST00000297979 F5H6K3 240 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 TNNI2P48788 182 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 PRELPP51888 382 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 KLRC3Q07444 240 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 INF2Q27J81 1249 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 COA7Q96BR5 231 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 TRIM44Q96DX7 344 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-202ENST00000297979 GMCL1Q96IK5 515 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 USP25Q9UHP3 1055 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 ZBTB5O15062 677 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 GMPSP49915 693 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-202ENST00000297979 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.19
C9orf3-202ENST00000297979 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
C9orf3-202ENST00000297979 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 CDAN1Q8IWY9 1227 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 REXO1Q8N1G1 1221 aaKnown RBP16.24■□□□□ 0.19
C9orf3-202ENST00000297979 CNNM3Q8NE01 707 aa16.24■□□□□ 0.19
C9orf3-202ENST00000297979 NDUFB10O96000 172 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 ADCY7P51828 1080 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 LONRF3Q496Y0 759 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-202ENST00000297979 DPF2Q92785 391 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 PGAP2Q9UHJ9 254 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 ARL6IP4Q66PJ3 421 aaKnown RBP16.23■□□□□ 0.19
C9orf3-202ENST00000297979 C11orf57Q6ZUT1 292 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-202ENST00000297979 MICALL2Q8IY33 904 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 ARHGEF10LQ9HCE6 1279 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 ZBTB21Q9ULJ3 1066 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 GJA3Q9Y6H8 435 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 VWA3AA6NCI4 1184 aa16.23■□□□□ 0.19
C9orf3-202ENST00000297979 POLR2DO15514 142 aaKnown RBP16.23■□□□□ 0.19
C9orf3-202ENST00000297979 PPP1R11O60927 126 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-202ENST00000297979 EGFRP00533 1210 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 TNFAIP1Q13829 316 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 HOOK1Q9UJC3 728 aaKnown RBP16.22■□□□□ 0.19
C9orf3-202ENST00000297979 A0A1W2PRG0 241 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 MIGA2Q7L4E1 593 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 CEP57L1Q8IYX8 460 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 C4orf32Q8N8J7 132 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 SYMPKQ92797 1274 aaKnown RBP16.22■□□□□ 0.19
C9orf3-202ENST00000297979 SPON1Q9HCB6 807 aa16.22■□□□□ 0.19
C9orf3-202ENST00000297979 RASA3Q14644 834 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 BIN2Q9UBW5 565 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-202ENST00000297979 TUBE1Q9UJT0 475 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 A0A087WWV3 80 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 MAP3K10Q02779 954 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 PNOCQ13519 176 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-202ENST00000297979 NAT10Q9H0A0 1025 aaKnown RBP16.21■□□□□ 0.19
C9orf3-202ENST00000297979 RIC8AQ9NPQ8 531 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 SERTAD1Q9UHV2 236 aa16.21■□□□□ 0.19
C9orf3-202ENST00000297979 CNOT7Q9UIV1 285 aaKnown RBP16.21■□□□□ 0.19
C9orf3-202ENST00000297979 ZNF541Q9H0D2 1346 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 LAD1O00515 517 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 BMP3P12645 472 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-202ENST00000297979 QRICH1Q2TAL8 776 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 JAKMIP3Q5VZ66 844 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 PDILTQ8N807 584 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 ACTN4O43707 911 aaKnown RBP16.2■□□□□ 0.18
C9orf3-202ENST00000297979 ADCY5O95622 1261 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 CAP2P40123 477 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 ECE1P42892 770 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 NLRP12P59046 1061 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 IL17AQ16552 155 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 KANK3Q6NY19 840 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 SAMD7Q7Z3H4 446 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 TMEM260Q9NX78 707 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 TMX2Q9Y320 296 aa16.2■□□□□ 0.18
C9orf3-202ENST00000297979 LONP1P36776 959 aaKnown RBP16.19■□□□□ 0.18
C9orf3-202ENST00000297979 IQCB1Q15051 598 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 LETM2Q2VYF4 491 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 TBCKQ8TEA7 893 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 CUL5Q93034 780 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 GOPCQ9HD26 462 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 BIN1O00499 593 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 MDM2Q00987 491 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-202ENST00000297979 IKQ13123 557 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-202ENST00000297979 POSTNQ15063 836 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 KIF4BQ2VIQ3 1234 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 DPCR1Q3MIW9 517 aa16.19■□□□□ 0.18
C9orf3-202ENST00000297979 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
C9orf3-202ENST00000297979 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms