RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 SMARCAL1Q9NZC9 954 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 MYO1AQ9UBC5 1043 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 AFDNP55196 1824 aaKnown RBP14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 KRT18P05783 430 aaKnown RBP14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 TXKP42681 527 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 GNGT1P63211 74 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 PPP2R5BQ15173 497 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 CCDC40Q4G0X9 1142 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 FAM114A1Q8IWE2 563 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 SRBD1Q8N5C6 995 aaKnown RBP14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 HPS3Q969F9 1004 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 CALML4Q96GE6 196 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 CNOT6LQ96LI5 555 aaKnown RBP14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 C1orf167Q5SNV9 1468 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 MAGEA1P43355 309 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 NT5DC1Q5TFE4 455 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 CDKAL1Q5VV42 579 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 PHF20Q9BVI0 1012 aa14.04□□□□□ -0.16
TMEM200A-201ENST00000296978 NDUFAB1O14561 156 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 MAP2K7O14733 419 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 MOCS3O95396 460 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 VEGFAP15692 232 aaPredicted RBP14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 USP14P54578 494 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 E2F4Q16254 413 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 SELENOOQ9BVL4 669 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 SAP30BPQ9UHR5 308 aaKnown RBP14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 WTIPA6NIX2 430 aaPredicted RBP14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 ATP2C2O75185 946 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 TECP42680 631 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 GUCY2FP51841 1108 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 C8orf74Q6P047 294 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 TMTC3Q6ZXV5 915 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 CABP7Q86V35 215 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 PPM1EQ8WY54 764 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 GOLGA6L10A6NI86 522 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 SEMA3EO15041 775 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 ADGRA1Q86SQ6 560 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 MSANTD4Q8NCY6 345 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 HNRNPLLQ8WVV9 542 aaKnown RBP14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 LACRTQ9GZZ8 138 aa14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 SEC63Q9UGP8 760 aaKnown RBP14.03□□□□□ -0.16
TMEM200A-201ENST00000296978 CRYBG1Q9Y4K1 1723 aa14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 NOP2P46087 812 aaKnown RBP14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 SF3A3Q12874 501 aaKnown RBP eCLIP14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 BRINP3Q76B58 766 aa14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 PNMA1Q8ND90 353 aa14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 PLA2G12BQ9BX93 195 aa14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 MLXIPQ9HAP2 919 aa14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 LIMA1Q9UHB6 759 aaKnown RBP14.02□□□□□ -0.16
TMEM200A-201ENST00000296978 BICDL2A1A5D9 508 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 HPDP32754 393 aaPredicted RBP14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 AMPD3Q01432 767 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 PKN1Q16512 942 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 DISC1Q9NRI5 854 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 LGALS16A8MUM7 142 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 VAV2P52735 878 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 TAF4BQ92750 862 aa14.02□□□□□ -0.17
TMEM200A-201ENST00000296978 OPA1O60313 960 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 CFAP58Q5T655 872 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 CARD10Q9BWT7 1032 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 CAPS2Q9BXY5 557 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 EHD2Q9NZN4 543 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 ARHGAP25P42331 645 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 PMS1P54277 932 aaKnown RBP14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 KCNQ4P56696 695 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 EVX2Q03828 476 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 COG1Q8WTW3 980 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 ANKIB1Q9P2G1 1089 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 TMCO5BA8MYB1 307 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 NCK2O43639 380 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 USP17L8P0C7I0 530 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 LONP1P36776 959 aaKnown RBP14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 RASSF7Q02833 373 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 LRRC31Q6UY01 552 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 RAB21Q9UL25 225 aa14.01□□□□□ -0.17
TMEM200A-201ENST00000296978 CDHR2Q9BYE9 1310 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 PPFIA4O75335 1185 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 ERLIN2O94905 339 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 PLCG1P19174 1290 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 EEF1GP26641 437 aaKnown RBP14□□□□□ -0.17
TMEM200A-201ENST00000296978 CT47A1Q5JQC4 288 aaPredicted RBP14□□□□□ -0.17
TMEM200A-201ENST00000296978 NFRKBQ6P4R8 1299 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 LUC7LQ9NQ29 371 aaKnown RBP14□□□□□ -0.17
TMEM200A-201ENST00000296978 PSD3Q9NYI0 1048 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 ESYT3A0FGR9 886 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 PLEKP08567 350 aaPredicted RBP14□□□□□ -0.17
TMEM200A-201ENST00000296978 FCER1AP12319 257 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 LRRC41Q15345 812 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 KLHL7Q8IXQ5 586 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 STAG2Q8N3U4 1231 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 NUP58Q9BVL2 599 aa14□□□□□ -0.17
TMEM200A-201ENST00000296978 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
TMEM200A-201ENST00000296978 MRC1P22897 1456 aa13.99□□□□□ -0.17
TMEM200A-201ENST00000296978 TRAF5O00463 557 aa13.99□□□□□ -0.17
TMEM200A-201ENST00000296978 CYP19A1P11511 503 aaPredicted RBP13.99□□□□□ -0.17
TMEM200A-201ENST00000296978 EIF4A3P38919 411 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms