RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FAM163AQ96GL9 167 aaPredicted RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 WDR24Q96S15 920 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 ZMYND12Q9H0C1 365 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 PRDM10Q9NQV6 1147 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 KCND1Q9NSA2 647 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 PPP2R2CQ9Y2T4 447 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 GTPBP6O43824 516 aaPredicted RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 LONP1P36776 959 aaKnown RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 GNAQP50148 359 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 FXR1P51114 621 aaKnown RBP eCLIP13.31□□□□□ -0.28
RHO-201ENST00000296271 UBE2SQ16763 222 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 SLC27A3Q5K4L6 730 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 CDC42EP5Q6NZY7 148 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 KIAA0825Q8IV33 1275 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 IGSF22Q8N9C0 903 aa13.31□□□□□ -0.28
RHO-201ENST00000296271 ZNF622Q969S3 477 aaKnown RBP eCLIP13.31□□□□□ -0.28
RHO-201ENST00000296271 MRPL44Q9H9J2 332 aaKnown RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
RHO-201ENST00000296271 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
RHO-201ENST00000296271 PLCG1P19174 1290 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 CASP14P31944 242 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 GABPAQ06546 454 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 KMT5BQ4FZB7 885 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 ARL6IP4Q66PJ3 421 aaKnown RBP13.3□□□□□ -0.28
RHO-201ENST00000296271 RAD9BQ6WBX8 426 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
RHO-201ENST00000296271 SPZ1Q9BXG8 430 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 EPC1Q9H2F5 836 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 LTBP1Q14766 1721 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 KLRC4O43908 158 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 TDP2O95551 362 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 UBA7P41226 1012 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 IRF2BP1Q8IU81 584 aa13.3□□□□□ -0.28
RHO-201ENST00000296271 SLC37A4O43826 429 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 GYPCP04921 128 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 SHMT1P34896 483 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 PBX1P40424 430 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 TXKP42681 527 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 SNAP25P60880 206 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 ETF1P62495 437 aaKnown RBP13.29□□□□□ -0.28
RHO-201ENST00000296271 ERCC6LQ2NKX8 1250 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 APOBEC3HQ6NTF7 200 aaKnown RBP13.29□□□□□ -0.28
RHO-201ENST00000296271 CCDC148Q8NFR7 591 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 TBC1D22AQ8WUA7 517 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 APBA3O96018 575 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 FCER1AP12319 257 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 PLCG2P16885 1265 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 DAGLBQ8NCG7 672 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 NUDT12Q9BQG2 462 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 MMTAG2Q9BU76 263 aaKnown RBP13.29□□□□□ -0.28
RHO-201ENST00000296271 DNAJC18Q9H819 358 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 MYH8P13535 1937 aa13.29□□□□□ -0.28
RHO-201ENST00000296271 TFRCP02786 760 aaKnown RBP13.28□□□□□ -0.28
RHO-201ENST00000296271 ERCC3P19447 782 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 PAK1Q13153 545 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 NONOQ15233 471 aaKnown RBP eCLIP13.28□□□□□ -0.28
RHO-201ENST00000296271 ZNF658Q5TYW1 1059 aaPredicted RBP13.28□□□□□ -0.28
RHO-201ENST00000296271 COA1Q9GZY4 146 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 LZTFL1Q9NQ48 299 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
RHO-201ENST00000296271 POTEMA6NI47 508 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 N4BP3O15049 544 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 ZBTB22O15209 634 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 ARHGAP6O43182 974 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 CHRNA5P30532 468 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 CABP7Q86V35 215 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 CCDC94Q9BW85 323 aaPredicted RBP13.28□□□□□ -0.28
RHO-201ENST00000296271 ZNF287Q9HBT7 754 aa13.28□□□□□ -0.28
RHO-201ENST00000296271 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.28
RHO-201ENST00000296271 KCNJ18B7U540 433 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 USP17L10C9JJH3 530 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.28
RHO-201ENST00000296271 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.28
RHO-201ENST00000296271 OR52Z1P0C646 297 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 KCNJ12Q14500 433 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 CCDC93Q567U6 631 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 TMED8Q6PL24 325 aaPredicted RBP13.27□□□□□ -0.28
RHO-201ENST00000296271 GPIHBP1Q8IV16 184 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 ADGRF4Q8IZF3 695 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 MAP7D2Q96T17 732 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 RIOX1Q9H6W3 641 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 JMJD4Q9H9V9 463 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 C6orf50Q9HD87 102 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 SERPINB13Q9UIV8 391 aa13.27□□□□□ -0.28
RHO-201ENST00000296271 G3V3G9 751 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 NRDCO43847 1150 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 SLU7O95391 586 aaKnown RBP13.27□□□□□ -0.29
RHO-201ENST00000296271 TXLNAP40222 546 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 COPB1P53618 953 aaKnown RBP13.27□□□□□ -0.29
RHO-201ENST00000296271 STK4Q13043 487 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 CCDC178Q5BJE1 867 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 DCAF8Q5TAQ9 597 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 SOGA3Q5TF21 947 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 NEK8Q86SG6 692 aa13.27□□□□□ -0.29
RHO-201ENST00000296271 REXO1Q8N1G1 1221 aaKnown RBP13.27□□□□□ -0.29
RHO-201ENST00000296271 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms