RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
CLPB-201ENST00000294053 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.52□□□□□ -0.25
CLPB-201ENST00000294053 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
CLPB-201ENST00000294053 SCN7AQ01118 1682 aa13.52□□□□□ -0.25
CLPB-201ENST00000294053 TM4SF1P30408 202 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 FUT2Q10981 343 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 CEP57Q86XR8 500 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 EPSTI1Q96J88 318 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 RUFY1Q96T51 708 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 CSRNP2Q9H175 543 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 TUBE1Q9UJT0 475 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 DUOX1Q9NRD9 1551 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 FXR1P51114 621 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLPB-201ENST00000294053 GBP6Q6ZN66 633 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 DYNLL2Q96FJ2 89 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 MED4Q9NPJ6 270 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 USP21Q9UK80 565 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 SUFUQ9UMX1 484 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 MAP9Q49MG5 647 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLPB-201ENST00000294053 HNRNPLLQ8WVV9 542 aaKnown RBP13.51□□□□□ -0.25
CLPB-201ENST00000294053 ANAPC4Q9UJX5 808 aa13.51□□□□□ -0.25
CLPB-201ENST00000294053 CCDC172P0C7W6 258 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 PDE6BP35913 854 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
CLPB-201ENST00000294053 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 CNTNAP4Q9C0A0 1308 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 GOLGA6BA6NDN3 693 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 RPS6KA4O75676 772 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 SYF2O95926 243 aaKnown RBP13.5□□□□□ -0.25
CLPB-201ENST00000294053 SLC44A5Q8NCS7 719 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 FOXP1Q9H334 677 aaPredicted RBP13.5□□□□□ -0.25
CLPB-201ENST00000294053 ANKIB1Q9P2G1 1089 aa13.5□□□□□ -0.25
CLPB-201ENST00000294053 NID2Q14112 1375 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 ZNF185O15231 689 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 PTPREP23469 700 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 KRT9P35527 623 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 MDM2Q00987 491 aaPredicted RBP13.49□□□□□ -0.25
CLPB-201ENST00000294053 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 WASF1Q92558 559 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 PCMTD1Q96MG8 357 aaPredicted RBP13.49□□□□□ -0.25
CLPB-201ENST00000294053 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 TAB2Q9NYJ8 693 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 CEP83Q9Y592 693 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 IRAK1P51617 712 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
CLPB-201ENST00000294053 ZNF174Q15697 407 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 NPY5RQ15761 445 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 SLC10A5Q5PT55 438 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 CATIPQ7Z7H3 387 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 CAPS2Q9BXY5 557 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 CD248Q9HCU0 757 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 DACH1Q9UI36 760 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 RAB21Q9UL25 225 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
CLPB-201ENST00000294053 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 MACROD2A1Z1Q3 448 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 SLC7A5Q01650 507 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
CLPB-201ENST00000294053 PDCLQ13371 301 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 TPTE2Q6XPS3 522 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 IQCA1Q86XH1 822 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 TMTC2Q8N394 836 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 CHP1Q99653 195 aa13.49□□□□□ -0.25
CLPB-201ENST00000294053 TNRC6CQ9HCJ0 1690 aaKnown RBP13.49□□□□□ -0.25
CLPB-201ENST00000294053 BTAF1O14981 1849 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
CLPB-201ENST00000294053 RILPL1Q5EBL4 403 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 MSANTD4Q8NCY6 345 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 MED15Q96RN5 788 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 FAM237AA0A1B0GTK4 181 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 USP8P40818 1118 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 KIRREL3Q8IZU9 778 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 PHF20Q9BVI0 1012 aa13.48□□□□□ -0.25
CLPB-201ENST00000294053 RNF26Q9BY78 433 aaPredicted RBP13.48□□□□□ -0.25
CLPB-201ENST00000294053 MYBL2P10244 700 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 USP5P45974 858 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 C2orf54Q08AI8 447 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 FAM196AQ6ZSG2 479 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 DZIP1Q86YF9 867 aaKnown RBP13.47□□□□□ -0.25
CLPB-201ENST00000294053 RASGRP4Q8TDF6 673 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 CPVLQ9H3G5 476 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 HPCAL4Q9UM19 191 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLPB-201ENST00000294053 TSPY2A6NKD2 308 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 STAG2Q8N3U4 1231 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 MLKLQ8NB16 471 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
CLPB-201ENST00000294053 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.25
CLPB-201ENST00000294053 BLZF1Q9H2G9 400 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 CNTNAP5Q8WYK1 1306 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 USP17L3A6NCW0 530 aa13.47□□□□□ -0.25
CLPB-201ENST00000294053 USP17L4A6NCW7 530 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms