RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 PDE2AO00408 941 aaPredicted RBP16.43■□□□□ 0.22
CCNF-201ENST00000293968 TACC1O75410 805 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 CYP2D6P10635 497 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 DNM2P50570 870 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 RNASE9P60153 205 aaKnown RBP16.43■□□□□ 0.22
CCNF-201ENST00000293968 KCTD16Q68DU8 428 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
CCNF-201ENST00000293968 BCAS4Q8TDM0 211 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 NIP7Q9Y221 180 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCNF-201ENST00000293968 MOCS3O95396 460 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 GNGT1P63211 74 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 TROAPQ12815 778 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 BLIDQ8IZY5 108 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 HPS3Q969F9 1004 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 CNOT6LQ96LI5 555 aaKnown RBP16.43■□□□□ 0.22
CCNF-201ENST00000293968 IFIH1Q9BYX4 1025 aaKnown RBP16.43■□□□□ 0.22
CCNF-201ENST00000293968 DISC1Q9NRI5 854 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
CCNF-201ENST00000293968 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 H0YHG0 523 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 PLEKP08567 350 aaPredicted RBP16.42■□□□□ 0.22
CCNF-201ENST00000293968 CAVIN4Q5BKX8 364 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 LRRC10BA6NIK2 292 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
CCNF-201ENST00000293968 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
CCNF-201ENST00000293968 ATP1A2P50993 1020 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 TDRD12Q587J7 1177 aaKnown RBP16.42■□□□□ 0.22
CCNF-201ENST00000293968 WDR59Q6PJI9 974 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 RRP36Q96EU6 259 aaKnown RBP16.42■□□□□ 0.22
CCNF-201ENST00000293968 CAPN11Q9UMQ6 739 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 JRKLQ9Y4A0 524 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 HDAC7Q8WUI4 952 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 IFT81Q8WYA0 676 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 FAM107BQ9H098 131 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
CCNF-201ENST00000293968 IRF2BP1Q8IU81 584 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 KIF13AQ9H1H9 1805 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
CCNF-201ENST00000293968 EEF1GP26641 437 aaKnown RBP16.41■□□□□ 0.22
CCNF-201ENST00000293968 KIF5BP33176 963 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 LRRC1Q9BTT6 524 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 CAPS2Q9BXY5 557 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 VAT1LQ9HCJ6 419 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 TCP11L1Q9NUJ3 509 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 MST1RQ04912 1400 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 BUB1O43683 1085 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 LONP1P36776 959 aaKnown RBP16.41■□□□□ 0.22
CCNF-201ENST00000293968 PAFAH1B1P43034 410 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 LETM2Q2VYF4 491 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 CCNI2Q6ZMN8 369 aaPredicted RBP16.41■□□□□ 0.22
CCNF-201ENST00000293968 NCK2O43639 380 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 FUT2Q10981 343 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
CCNF-201ENST00000293968 CNTNAP5Q8WYK1 1306 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 CALML3P27482 149 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 NFRKBQ6P4R8 1299 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 CACNA2D4Q7Z3S7 1137 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 RPGRIP1Q96KN7 1286 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 HSF2BPO75031 334 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 RCAN1P53805 252 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 CORO7P57737 925 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
CCNF-201ENST00000293968 GPATCH11Q8N954 259 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 DNAJC7Q99615 494 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 TMEM60Q9H2L4 133 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 SLC39A2Q9NP94 309 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
CCNF-201ENST00000293968 DDAH1O94760 285 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 ICE2Q659A1 982 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 ALS2CR12Q96Q35 445 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
CCNF-201ENST00000293968 FCER1AP12319 257 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 FAM205AQ6ZU69 1335 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 GOLGA8HP0CJ92 632 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 ARID5AQ03989 594 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 RRAGAQ7L523 313 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 DMGDHQ9UI17 866 aaKnown RBP16.39■□□□□ 0.21
CCNF-201ENST00000293968 ERLIN2O94905 339 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
CCNF-201ENST00000293968 NPY5RQ15761 445 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 PAPD7Q5XG87 772 aaKnown RBP16.39■□□□□ 0.21
CCNF-201ENST00000293968 THAP9Q9H5L6 903 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CCNF-201ENST00000293968 IBSPP21815 317 aaPredicted RBP16.38■□□□□ 0.21
CCNF-201ENST00000293968 ZBED6P86452 979 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 ANKRD40Q6AI12 368 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 DYMQ7RTS9 669 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 FAM114A1Q8IWE2 563 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 PLCG1P19174 1290 aa16.38■□□□□ 0.21
CCNF-201ENST00000293968 FECHP22830 423 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms