RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 CTAGE5O15320 804 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 RAD21O60216 631 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 ZEB2O60315 1214 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 BCAR3O75815 825 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 CCL23P55773 120 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 ITGA7Q13683 1181 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 C16orf86Q6ZW13 317 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 ARMCX2Q7L311 632 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 ANKRD35Q8N283 1001 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
USP41-201ENST00000292729 HLA-CQ95604 372 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 NOC4LQ9BVI4 516 aaKnown RBP12.54□□□□□ -0.4
USP41-201ENST00000292729 CTDP1Q9Y5B0 961 aaPredicted RBP12.54□□□□□ -0.4
USP41-201ENST00000292729 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 MYH4Q9Y623 1939 aa12.54□□□□□ -0.4
USP41-201ENST00000292729 MYH7P12883 1935 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 TCRBV5S4A2TA0A5A2 114 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 MYOGP15173 224 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 TNFAIP2Q03169 654 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 C12orf60Q5U649 245 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 CXCL17Q6UXB2 119 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 ERC1Q8IUD2 1116 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 CHST13Q8NET6 341 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 DDRGK1Q96HY6 314 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
USP41-201ENST00000292729 PI4K2BG5E9Z4 385 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 ZBED4O75132 1171 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 CA3P07451 260 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 ACTN1P12814 892 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 OAZ1P54368 228 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 BEX3Q00994 111 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 AACSQ86V21 672 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 ALYREFQ86V81 257 aaKnown RBP12.52□□□□□ -0.41
USP41-201ENST00000292729 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 CPXCR1Q8N123 301 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 PHOSPHO2Q8TCD6 241 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.52□□□□□ -0.41
USP41-201ENST00000292729 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
USP41-201ENST00000292729 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 FGD4Q96M96 766 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 SLC9A7Q96T83 725 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 AP5M1Q9H0R1 490 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 C11orf16Q9NQ32 467 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 GNEQ9Y223 722 aaKnown RBP12.52□□□□□ -0.41
USP41-201ENST00000292729 Q9Y3F1 56 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 SCN5AQ14524 2016 aa12.52□□□□□ -0.41
USP41-201ENST00000292729 KIF28PB7ZC32 967 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 RFXAPO00287 272 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 B4GALT4O60513 344 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 SUPT20HL2P0C7V6 817 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 FSCN1Q16658 493 aaKnown RBP12.51□□□□□ -0.41
USP41-201ENST00000292729 NOL8Q76FK4 1167 aaKnown RBP12.51□□□□□ -0.41
USP41-201ENST00000292729 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 TMEM57Q8N5G2 664 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 AGBL1Q96MI9 1066 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 ARMT1Q9H993 441 aa12.51□□□□□ -0.41
USP41-201ENST00000292729 ASB14A6NK59 587 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 PRR33A8MZF0 331 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 USP17L12C9JPN9 530 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 USP17L21D6R901 530 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 F5H6K3 240 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 SMIM22K7EJ46 135 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 FDX1P10109 184 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 RFC2P35250 354 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 KLRC3Q07444 240 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 SCLYQ96I15 445 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 TRPV6Q9H1D0 765 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 SLC38A10Q9HBR0 1119 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 LMCD1Q9NZU5 365 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 TNNQ9UQP3 1299 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 ASTN1O14525 1302 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 GRIN2DO15399 1336 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 COL4A4P53420 1690 aaPredicted RBP12.5□□□□□ -0.41
USP41-201ENST00000292729 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
USP41-201ENST00000292729 BRWD1Q9NSI6 2320 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.49□□□□□ -0.41
USP41-201ENST00000292729 GOLIM4O00461 696 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 PRKAB2O43741 272 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 MBD4O95243 580 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 TTLL4Q14679 1199 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 ZKSCAN2Q63HK3 967 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 IQSEC1Q6DN90 963 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 FAM133AQ8N9E0 248 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 ARNTL2Q8WYA1 636 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 KHSRPQ92945 711 aaKnown RBP eCLIP12.49□□□□□ -0.41
USP41-201ENST00000292729 VWCEQ96DN2 955 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 NUP88Q99567 741 aaPredicted RBP12.49□□□□□ -0.41
USP41-201ENST00000292729 CERS4Q9HA82 394 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 RAVER2Q9HCJ3 691 aaKnown RBP12.49□□□□□ -0.41
USP41-201ENST00000292729 FEM1BQ9UK73 627 aa12.49□□□□□ -0.41
USP41-201ENST00000292729 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 CYP2D7A0A087X1C5 515 aa12.48□□□□□ -0.41
USP41-201ENST00000292729 FAM86C2PA6NEL3 165 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms