RNA–Protein interactions for RNA: ENST00000292393.9

ZNF3-201, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-201ENST00000292393 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 M0R2N6 131 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 KIF3CO14782 793 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 PPP1R11O60927 126 aaPredicted RBP13.92□□□□□ -0.18
ZNF3-201ENST00000292393 MCM4P33991 863 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 KRT85P78386 507 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.18
ZNF3-201ENST00000292393 USP17L24Q0WX57 530 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 CATSPERGQ6ZRH7 1159 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 FBXO11Q86XK2 927 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 BLIDQ8IZY5 108 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 TNFRSF25Q93038 417 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 KIFC2Q96AC6 838 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 ZNF396Q96N95 335 aaPredicted RBP13.92□□□□□ -0.18
ZNF3-201ENST00000292393 TANGO6Q9C0B7 1094 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 CFAP45Q9UL16 551 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 ADAMTS5Q9UNA0 930 aa13.92□□□□□ -0.18
ZNF3-201ENST00000292393 SMCO2A6NFE2 343 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 DDX11L8A8MPP1 907 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 GOLGA6L22H0YM25 854 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 FLOT1O75955 427 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 ZBTB48P10074 688 aaPredicted RBP13.91□□□□□ -0.18
ZNF3-201ENST00000292393 HOXA7P31268 230 aaPredicted RBP13.91□□□□□ -0.18
ZNF3-201ENST00000292393 OAZ1P54368 228 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 SNAPC2Q13487 334 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 MYSM1Q5VVJ2 828 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 CST9Q5W186 159 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 MCTP2Q6DN12 878 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
ZNF3-201ENST00000292393 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 RIC8AQ9NPQ8 531 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 FBXO28Q9NVF7 368 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 PCDHA1Q9Y5I3 950 aa13.91□□□□□ -0.18
ZNF3-201ENST00000292393 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 ICAM1P05362 532 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 DSG3P32926 999 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 MRPL12P52815 198 aaKnown RBP13.9□□□□□ -0.18
ZNF3-201ENST00000292393 DNM1Q05193 864 aaKnown RBP13.9□□□□□ -0.18
ZNF3-201ENST00000292393 DGKZQ13574 1117 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 COG2Q14746 738 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 RILPL1Q5EBL4 403 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 OXER1Q8TDS5 423 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 COA7Q96BR5 231 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 SCAND2PQ9GZW5 306 aaPredicted RBP13.9□□□□□ -0.18
ZNF3-201ENST00000292393 HOXC10Q9NYD6 342 aa13.9□□□□□ -0.18
ZNF3-201ENST00000292393 ABCB11O95342 1321 aa13.9□□□□□ -0.19
ZNF3-201ENST00000292393 ZBED4O75132 1171 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 TRAPPC10P48553 1259 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
ZNF3-201ENST00000292393 ADCY7P51828 1080 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 GTF2A2P52657 109 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 NR5A1Q13285 461 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.19
ZNF3-201ENST00000292393 MOGSQ13724 837 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 NFKBIBQ15653 356 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 LBX2Q6XYB7 198 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 CUL5Q93034 780 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 MAF1Q9H063 256 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 POLR3EQ9NVU0 708 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 SLC45A1Q9Y2W3 748 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 MORC2Q9Y6X9 1032 aaPredicted RBP13.89□□□□□ -0.19
ZNF3-201ENST00000292393 ZNF536O15090 1300 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 ELP1O95163 1332 aa13.89□□□□□ -0.19
ZNF3-201ENST00000292393 PTPRFP10586 1907 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 VWA5AO00534 786 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 TOMM70O94826 608 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 GJA5P36382 358 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
ZNF3-201ENST00000292393 FAM173BQ6P4H8 233 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 KRT25Q7Z3Z0 450 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
ZNF3-201ENST00000292393 SAMD3Q8N6K7 520 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 MB21D1Q8N884 522 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 REPS2Q8NFH8 660 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 PSTPIP2Q9H939 334 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 RTEL1Q9NZ71 1219 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 NOL7Q9UMY1 257 aaKnown RBP13.88□□□□□ -0.19
ZNF3-201ENST00000292393 PCDHA6Q9UN73 950 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 MRPL11Q9Y3B7 192 aaKnown RBP13.88□□□□□ -0.19
ZNF3-201ENST00000292393 PCDHA8Q9Y5H6 950 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
ZNF3-201ENST00000292393 PIK3CDO00329 1044 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 YEATS4O95619 227 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 CETPP11597 493 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 GHRHRQ02643 423 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 FSTL1Q12841 308 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 TREML2Q5T2D2 321 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 GADL1Q6ZQY3 521 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 ATG4CQ96DT6 458 aa13.87□□□□□ -0.19
ZNF3-201ENST00000292393 HHIPL1Q96JK4 782 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms