RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 TTBK2Q6IQ55 1244 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 MAMDC4Q6UXC1 1216 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 KCTD1Q719H9 257 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 MYLIPQ8WY64 445 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 DDX11Q96FC9 970 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 CDX2Q99626 313 aaPredicted RBP10.51□□□□□ -0.73
TFF1-201ENST00000291527 PDGFCQ9NRA1 345 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 SLC5A4Q9NY91 659 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 SCN5AQ14524 2016 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
TFF1-201ENST00000291527 GRXCR1A8MXD5 290 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 ATP2A1O14983 1001 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 KIAA0355O15063 1070 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 ZBED4O75132 1171 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 TTLL1O95922 423 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 CLTBP09497 229 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 BMP3P12645 472 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 AKR1A1P14550 325 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 CDK7P50613 346 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 C1orf53Q5VUE5 145 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 CCDC174Q6PII3 467 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 CCDC144CPQ8IYA2 1237 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 GMCL1P1Q8NEA9 526 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 FAM227BQ96M60 508 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 FSD1Q9BTV5 496 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 COL25A1Q9BXS0 654 aaPredicted RBP10.5□□□□□ -0.73
TFF1-201ENST00000291527 FEM1BQ9UK73 627 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 TTC28Q96AY4 2481 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 GRIN2DO15399 1336 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 PLIN4Q96Q06 1357 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 TRANK1O15050 2925 aa10.5□□□□□ -0.73
TFF1-201ENST00000291527 A0A0D9SFI3 127 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 ASGR1P07306 291 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 ZFYP08048 801 aaPredicted RBP10.49□□□□□ -0.73
TFF1-201ENST00000291527 TSPY3P0CV98 308 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 TSPY8P0CW00 308 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 SLC16A2P36021 539 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 ANKRD45Q5TZF3 282 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 ARMCX2Q7L311 632 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 RNF180Q86T96 592 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 ZNF589Q86UQ0 364 aaPredicted RBP10.49□□□□□ -0.73
TFF1-201ENST00000291527 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 FAM133AQ8N9E0 248 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 VWCEQ96DN2 955 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 CHMP4BQ9H444 224 aaKnown RBP10.49□□□□□ -0.73
TFF1-201ENST00000291527 A1CFQ9NQ94 594 aaKnown RBP10.49□□□□□ -0.73
TFF1-201ENST00000291527 TMEM39AQ9NV64 488 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 PRKAG2Q9UGJ0 569 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 NRBP1Q9UHY1 535 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 FAM184BQ9ULE4 1060 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 UMODL1Q5DID0 1318 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 SYNGAP1Q96PV0 1343 aa10.49□□□□□ -0.73
TFF1-201ENST00000291527 DUSP11O75319 330 aaKnown RBP10.48□□□□□ -0.73
TFF1-201ENST00000291527 C6orf222P0C671 652 aaPredicted RBP10.48□□□□□ -0.73
TFF1-201ENST00000291527 ACRP10323 421 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 GNAT2P19087 354 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 MX1P20591 662 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 PBX2P40425 430 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
TFF1-201ENST00000291527 EEPD1Q7L9B9 569 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 ANKRD33Q7Z3H0 272 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 USP38Q8NB14 1042 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 STAG1Q8WVM7 1258 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.48□□□□□ -0.73
TFF1-201ENST00000291527 NAPBQ9H115 298 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 UPF3AQ9H1J1 476 aaKnown RBP10.48□□□□□ -0.73
TFF1-201ENST00000291527 STARD7Q9NQZ5 370 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 RNF146Q9NTX7 359 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 TBX21Q9UL17 535 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 PRR12Q9ULL5 1215 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 ISY1Q9ULR0 285 aaKnown RBP10.48□□□□□ -0.73
TFF1-201ENST00000291527 CNPY2Q9Y2B0 182 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 TTC41PQ6P2S7 1318 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 TET1Q8NFU7 2136 aa10.48□□□□□ -0.73
TFF1-201ENST00000291527 TRIP12Q14669 1992 aaPredicted RBP10.47□□□□□ -0.73
TFF1-201ENST00000291527 ALAS1P13196 640 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 RAG1P15918 1043 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 SMPD1P17405 629 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 NOVP48745 357 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 RRP1P56182 461 aaKnown RBP10.47□□□□□ -0.73
TFF1-201ENST00000291527 GJA9P57773 515 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 HAND2P61296 217 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 GRIN2CQ14957 1233 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 TAPT1Q6NXT6 567 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 ZNF467Q7Z7K2 595 aaPredicted RBP10.47□□□□□ -0.73
TFF1-201ENST00000291527 GPATCH3Q96I76 525 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 TRERF1Q96PN7 1200 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 TSEN34Q9BSV6 310 aaKnown RBP10.47□□□□□ -0.73
TFF1-201ENST00000291527 CPVLQ9H3G5 476 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 PRDM6Q9NQX0 595 aa10.47□□□□□ -0.73
TFF1-201ENST00000291527 GNEQ9Y223 722 aaKnown RBP10.47□□□□□ -0.73
TFF1-201ENST00000291527 FRMPD2Q68DX3 1309 aaPredicted RBP10.47□□□□□ -0.73
TFF1-201ENST00000291527 RANBP6O60518 1105 aaKnown RBP10.46□□□□□ -0.73
TFF1-201ENST00000291527 TIMP1P01033 207 aa10.46□□□□□ -0.73
TFF1-201ENST00000291527 FGAP02671 866 aa10.46□□□□□ -0.73
TFF1-201ENST00000291527 CSF2RAP15509 400 aa10.46□□□□□ -0.73
TFF1-201ENST00000291527 CYP2C18P33260 490 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms