RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 PP2D1A8MPX8 630 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 CAVIN2O95810 425 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 PTMAP06454 111 aaKnown RBP19.03■□□□□ 0.64
HIF3A-203ENST00000291300 TAL1P17542 331 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-203ENST00000291300 SLC1A4P43007 532 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 POSTNQ15063 836 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 UBE2SQ16763 222 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 KIAA1755Q5JYT7 1200 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 GPATCH4Q5T3I0 446 aaKnown RBP19.03■□□□□ 0.64
HIF3A-203ENST00000291300 RBM26Q5T8P6 1007 aaKnown RBP19.03■□□□□ 0.64
HIF3A-203ENST00000291300 PGAP2Q9UHJ9 254 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 F5H6K3 240 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 NDUFB10O96000 172 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 ECE1P42892 770 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 KLRC3Q07444 240 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 HS1BP3Q53T59 392 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 ZSCAN30Q86W11 494 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 CCDC12Q8WUD4 166 aaPredicted RBP19.03■□□□□ 0.64
HIF3A-203ENST00000291300 STAMQ92783 540 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 CCDC39Q9UFE4 941 aa19.03■□□□□ 0.64
HIF3A-203ENST00000291300 ESYT2A0FGR8 921 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 GNA11P29992 359 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 ZNF75DP51815 510 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 NCAPHQ15003 741 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 LETM2Q2VYF4 491 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 SPICE1Q8N0Z3 855 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 REXO1Q8N1G1 1221 aaKnown RBP19.02■□□□□ 0.64
HIF3A-203ENST00000291300 MTMR14Q8NCE2 650 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 ACER1Q8TDN7 264 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 TBCKQ8TEA7 893 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 JDP2Q8WYK2 163 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 MYOZ2Q9NPC6 264 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 MAN1B1Q9UKM7 699 aa19.02■□□□□ 0.64
HIF3A-203ENST00000291300 ASTN2O75129 1339 aaPredicted RBP19.02■□□□□ 0.64
HIF3A-203ENST00000291300 SRCAPQ6ZRS2 3230 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 AFMP43652 599 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 NONOQ15233 471 aaKnown RBP eCLIP19.01■□□□□ 0.63
HIF3A-203ENST00000291300 TRIM5Q9C035 493 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.01■□□□□ 0.63
HIF3A-203ENST00000291300 BECN2A8MW95 431 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 GOLGA6L19H0YKK7 550 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 ZBTB5O15062 677 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 SARSP49591 514 aaKnown RBP19.01■□□□□ 0.63
HIF3A-203ENST00000291300 ADCY7P51828 1080 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 ZRSR1Q15695 479 aaKnown RBP19.01■□□□□ 0.63
HIF3A-203ENST00000291300 QRICH1Q2TAL8 776 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 KRT25Q7Z3Z0 450 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 CCDC84Q86UT8 332 aaPredicted RBP19.01■□□□□ 0.63
HIF3A-203ENST00000291300 DCAF4Q8WV16 495 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 PAGE5Q96GU1 130 aa19.01■□□□□ 0.63
HIF3A-203ENST00000291300 HERC5Q9UII4 1024 aaKnown RBP19.01■□□□□ 0.63
HIF3A-203ENST00000291300 CCNT1O60563 726 aaKnown RBP19■□□□□ 0.63
HIF3A-203ENST00000291300 E2F4Q16254 413 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 SH3RF1Q7Z6J0 888 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 ELOA2Q8IYF1 753 aaPredicted RBP19■□□□□ 0.63
HIF3A-203ENST00000291300 MTRQ99707 1265 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 HSD3B7Q9H2F3 369 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 TTC12Q9H892 705 aaPredicted RBP19■□□□□ 0.63
HIF3A-203ENST00000291300 NRBP1Q9UHY1 535 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 SLFN14P0C7P3 912 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 ARL6IP4Q66PJ3 421 aaKnown RBP19■□□□□ 0.63
HIF3A-203ENST00000291300 FAM177A1Q8N128 213 aaPredicted RBP19■□□□□ 0.63
HIF3A-203ENST00000291300 UPF1Q92900 1129 aaKnown RBP eCLIP19■□□□□ 0.63
HIF3A-203ENST00000291300 CD2APQ9Y5K6 639 aa19■□□□□ 0.63
HIF3A-203ENST00000291300 SMCHD1A6NHR9 2005 aa18.99■□□□□ 0.63
HIF3A-203ENST00000291300 SAMD7Q7Z3H4 446 aa18.99■□□□□ 0.63
HIF3A-203ENST00000291300 NEK8Q86SG6 692 aa18.99■□□□□ 0.63
HIF3A-203ENST00000291300 BPIFA3Q9BQP9 254 aa18.99■□□□□ 0.63
HIF3A-203ENST00000291300 NAT10Q9H0A0 1025 aaKnown RBP18.99■□□□□ 0.63
HIF3A-203ENST00000291300 ZKSCAN5Q9Y2L8 839 aa18.99■□□□□ 0.63
HIF3A-203ENST00000291300 KARSQ15046 597 aaKnown RBP18.98■□□□□ 0.63
HIF3A-203ENST00000291300 CDC37Q16543 378 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-203ENST00000291300 NT5DC1Q5TFE4 455 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 PDXDC2PQ6P474 469 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 GMCL1P1Q8NEA9 526 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 LRRC15Q8TF66 581 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 GLIS2Q9BZE0 524 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-203ENST00000291300 RIC8AQ9NPQ8 531 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 hCG_1984214I3L0E3 225 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 TDP2O95551 362 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 PPP4R3BQ5MIZ7 849 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 ZNF713Q8N859 430 aaPredicted RBP18.98■□□□□ 0.63
HIF3A-203ENST00000291300 SPATA20Q8TB22 786 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 ZBTB21Q9ULJ3 1066 aa18.98■□□□□ 0.63
HIF3A-203ENST00000291300 TMEM232C9JQI7 657 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 SLC37A4O43826 429 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 LONP1P36776 959 aaKnown RBP18.97■□□□□ 0.63
HIF3A-203ENST00000291300 CLK2P49760 499 aaKnown RBP18.97■□□□□ 0.63
HIF3A-203ENST00000291300 GMPSP49915 693 aaPredicted RBP18.97■□□□□ 0.63
HIF3A-203ENST00000291300 MORC3Q14149 939 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 FKBP1CQ5VVH2 108 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 SARM1Q6SZW1 724 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 DTHD1Q6ZMT9 781 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 SMARCE1Q969G3 411 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 PLIN2Q99541 437 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 KCNF1Q9H3M0 494 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 MYH7BA7E2Y1 1941 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L15C9J2P7 530 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms