RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 GBP5Q96PP8 586 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 EYA3Q99504 573 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 ABCB6Q9NP58 842 aa16.87■□□□□ 0.29
SHROOM4-201ENST00000289292 CDC25AP30304 524 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 CCDC89Q8N998 374 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 LINC00301Q8NCQ3 95 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 STAT1P42224 750 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 LRRC41Q15345 812 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 ODF2LQ9ULJ1 636 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 MAST3O60307 1309 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 OR52Z1P0C646 297 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 NR5A1Q13285 461 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 NUCKS1Q9H1E3 243 aaKnown RBP16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 PRR16Q569H4 304 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 BAG2O95816 211 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 PHKA1P46020 1223 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 KIF23Q02241 960 aaPredicted RBP16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 CEP128Q6ZU80 1094 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
SHROOM4-201ENST00000289292 BSPRYQ5W0U4 402 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 CRCPO75575 148 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 FTCDO95954 541 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 TCP1P17987 556 aaKnown RBP16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 ZMYM1Q5SVZ6 1142 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 EPC1Q9H2F5 836 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 POLR3EQ9NVU0 708 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 FMNL1O95466 1100 aaPredicted RBP16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 GNA14O95837 355 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 KRT19P08727 400 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 LLGL1Q15334 1064 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 PGBD1Q96JS3 809 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 KLHL14Q9P2G3 628 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 PARP2Q9UGN5 583 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 TMEM232C9JQI7 657 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 PARP10Q53GL7 1025 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 KAZNQ674X7 775 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 VSTM4Q8IW00 320 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 CPXCR1Q8N123 301 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 EXOC7Q9UPT5 735 aa16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 RAB3IPQ96QF0 476 aaPredicted RBP16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 JPH2Q9BR39 696 aaPredicted RBP16.85■□□□□ 0.29
SHROOM4-201ENST00000289292 IFNB1P01574 187 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 GREM2Q9H772 168 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 THAP12O43422 761 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 ANKRD20A3Q5VUR7 823 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 GPHNQ9NQX3 736 aaPredicted RBP16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 IKBKBO14920 756 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 DDX25Q9UHL0 483 aaKnown RBP16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 FAM133BQ5BKY9 247 aaKnown RBP16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 CTAGE3PQ8IX95 158 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 PNMA1Q8ND90 353 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 ADAM9Q13443 819 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 EPSTI1Q96J88 318 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 ARPP21Q9UBL0 812 aaPredicted RBP16.84■□□□□ 0.29
SHROOM4-201ENST00000289292 ARHGAP42A6NI28 874 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 DAPK3O43293 454 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 HEXIM1O94992 359 aaKnown RBP16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 MAN1A1P33908 653 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 LZTS2Q9BRK4 669 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 TBC1D10BQ4KMP7 808 aaPredicted RBP16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 CROCCP2Q86T23 111 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 PALM2Q8IXS6 379 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 EFCAB13Q8IY85 973 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.29
SHROOM4-201ENST00000289292 FAM102BQ5T8I3 360 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 APOA5Q6Q788 366 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 GAS8O95995 478 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 CD19P15391 556 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 CCDC144BQ3MJ40 725 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 NEK8Q86SG6 692 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 GSPT2Q8IYD1 628 aaKnown RBP16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 PUS7LQ9H0K6 701 aaKnown RBP16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 ATF7P17544 494 aaPredicted RBP16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 TNNI1P19237 187 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
SHROOM4-201ENST00000289292 BCORL1Q5H9F3 1711 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 SLC8A1P32418 973 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 RNF34Q969K3 372 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 RCOR1Q9UKL0 485 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 PCDHB6Q9Y5E3 794 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 CASQ2O14958 399 aaPredicted RBP16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 PRKAB2O43741 272 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 CCDC87Q9NVE4 849 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 USH1CQ9Y6N9 552 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 OPHN1O60890 802 aa16.82■□□□□ 0.28
SHROOM4-201ENST00000289292 SRGAP2O75044 1071 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms