RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 MCM4P33991 863 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SMTNP53814 917 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SSRP1Q08945 709 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 KSR1Q8IVT5 923 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SNX19Q92543 992 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 GLG1Q92896 1179 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 MAGEB10Q96LZ2 347 aaPredicted RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 ADPGKQ9BRR6 497 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 PANK3Q9H999 370 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 ASAP1Q9ULH1 1129 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 STK38LQ9Y2H1 464 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SOWAHDA6NJG2 315 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 KBTBD13C9JR72 458 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CES2O00748 559 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 KDM1AO60341 852 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TFRCP02786 760 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 EPHB1P54762 984 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CBFBQ13951 182 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 DCAF15Q66K64 600 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CERS3Q8IU89 383 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 MRPS27Q92552 414 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 PHF21AQ96BD5 680 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC124Q96CT7 223 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TRIM11Q96F44 468 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 GBP5Q96PP8 586 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 EPAS1Q99814 870 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 BCL2L12Q9HB09 334 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SENP2Q9HC62 589 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 RTCBQ9Y3I0 505 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 FAM170AA1A519 330 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 PSMD12O00232 456 aaPredicted RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TXNDC9O14530 226 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 ABL2P42684 1182 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 PPP2R3AQ06190 1150 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 ABRQ12979 859 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 KAZNQ674X7 775 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 ST13P5Q8NFI4 369 aaPredicted RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 KIF18AQ8NI77 898 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 PAWRQ96IZ0 340 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC85AQ96PX6 553 aaPredicted RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 IFIH1Q9BYX4 1025 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 DNAJC25Q9H1X3 360 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 XAB2Q9HCS7 855 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 GGT7Q9UJ14 662 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 MAD1L1Q9Y6D9 718 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 MAP3K15Q6ZN16 1313 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TRIM75PA6NK02 468 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 H0YC42 278 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TMCC1O94876 653 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TMOD1P28289 359 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 PDX1P52945 283 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 COPB1P53618 953 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 DHX34Q14147 1143 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 TRIM60Q495X7 471 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 NBPF10Q6P3W6 841 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 RSRC2Q7L4I2 434 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 GSDMAQ96QA5 445 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SEC62Q99442 399 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CRNKL1Q9BZJ0 848 aaKnown RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 NAPBQ9H115 298 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC134Q9H6E4 229 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 POLE3Q9NRF9 147 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 SAE1Q9UBE0 346 aaPredicted RBP4.8□□□□□ -1.64
NCOA1-201ENST00000288599 FBXL5Q9UKA1 691 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 HCN4Q9Y3Q4 1203 aa4.8□□□□□ -1.64
NCOA1-201ENST00000288599 VSTM5A8MXK1 200 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 GOLGA8RI6L899 631 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 SMIM24O75264 130 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 ECE1P42892 770 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 PRIM1P49642 420 aaKnown RBP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 CKAP4Q07065 602 aaKnown RBP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 CEP85LQ5SZL2 805 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 BTBD8Q5XKL5 378 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 MTSS1LQ765P7 747 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 ZSCAN30Q86W11 494 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TDRPQ86YL5 185 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TEX11Q8IYF3 940 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 SPATA18Q8TC71 538 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 FAR1Q8WVX9 515 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 PANK2Q9BZ23 570 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TPX2Q9ULW0 747 aaKnown RBP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 ACEP12821 1306 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 ZSCAN5CA6NGD5 496 aaPredicted RBP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 GHRP10912 638 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 SFPQP23246 707 aaKnown RBP eCLIP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 NOS2P35228 1153 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 AMPD2Q01433 879 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 MAP3K21Q5TCX8 1036 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 CCDC121Q6ZUS5 278 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TMC6Q7Z403 805 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 CTAGE6Q86UF2 777 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TRIM48Q8IWZ4 208 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 CMTR1Q8N1G2 835 aaKnown RBP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TEX13AQ9BXU3 409 aaPredicted RBP4.79□□□□□ -1.64
NCOA1-201ENST00000288599 KLHL25Q9H0H3 589 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 KCNK9Q9NPC2 374 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 TULP4Q9NRJ4 1543 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 LRRC14BA6NHZ5 514 aa4.79□□□□□ -1.64
NCOA1-201ENST00000288599 CYP2C19P33261 490 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms