RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 PCDHA4Q9UN74 947 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 VGLL4Q14135 290 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 ZSCAN23Q3MJ62 389 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 GAS2L3Q86XJ1 694 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 CDCA5Q96FF9 252 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 AGBL1Q96MI9 1066 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 GOLPH3LQ9H4A5 285 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 RCOR1Q9UKL0 485 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 PCDHA6Q9UN73 950 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 PCDHA8Q9Y5H6 950 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 BRCA1P38398 1863 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 CDK5RAP2Q96SN8 1893 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 VWA3AA6NCI4 1184 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 CCNT1O60563 726 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 NOVP48745 357 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 MAP3K14Q99558 947 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 RPAP3Q9H6T3 665 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 RTEL1Q9NZ71 1219 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 CSADQ9Y600 493 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 CENPFP49454 3210 aa11.22□□□□□ -0.61
PPP4R1-201ENST00000285124 MARCH6O60337 910 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 CALML3P27482 149 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 PTGDRQ13258 359 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 TTC38Q5R3I4 469 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 GADL1Q6ZQY3 521 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 SCYL3Q8IZE3 742 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 REXO1Q8N1G1 1221 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 CCDC148Q8NFR7 591 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 TBCKQ8TEA7 893 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 WNK4Q96J92 1243 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 SDF4Q9BRK5 362 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
PPP4R1-201ENST00000285124 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 MBD3O95983 291 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 ALAS1P13196 640 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 NF2P35240 595 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 ADCY7P51828 1080 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 PLCB2Q00722 1185 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 ZNF280CQ8ND82 737 aa11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 NOL7Q9UMY1 257 aaKnown RBP11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 POLR2AP24928 1970 aaKnown RBP11.21□□□□□ -0.62
PPP4R1-201ENST00000285124 VCAM1P19320 739 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 GNA11P29992 359 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 NDUFA8P51970 172 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 RILPL1Q5EBL4 403 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 STAMQ92783 540 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 IQCA1LA6NCM1 817 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 SLC39A14Q15043 492 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 TRMT1LQ7Z2T5 733 aaKnown RBP11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 RASSF8Q8NHQ8 419 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 AMNQ9BXJ7 453 aa11.2□□□□□ -0.62
PPP4R1-201ENST00000285124 IRF6O14896 467 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 USP50Q70EL3 339 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 CCDC12Q8WUD4 166 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 CHURC1Q8WUH1 139 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 ATG4CQ96DT6 458 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 EPSTI1Q96J88 318 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 SH2D4AQ9H788 454 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 BIN1O00499 593 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 PTMSP20962 102 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 BACE1P56817 501 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 KCNG4Q8TDN1 519 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 GMCL1Q96IK5 515 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 NID2Q14112 1375 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 PP2D1A8MPX8 630 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 DHX8Q14562 1220 aaKnown RBP11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 PTPAQ15257 358 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 WDR78Q5VTH9 848 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 NSMFQ6X4W1 530 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 ZMYND12Q9H0C1 365 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 TMEM60Q9H2L4 133 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 TNMDQ9H2S6 317 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 CCPG1Q9ULG6 757 aa11.19□□□□□ -0.62
PPP4R1-201ENST00000285124 ECM29Q5VYK3 1845 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 TDP2O95551 362 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 TXKP42681 527 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 IREB2P48200 963 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 NT5C2P49902 561 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 MRPL12P52815 198 aaKnown RBP11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 MAP3K10Q02779 954 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 CUL5Q93034 780 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 PAGR1Q9BTK6 254 aa11.18□□□□□ -0.62
PPP4R1-201ENST00000285124 TMOD4Q9NZQ9 345 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms