RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CHURC1Q8WUH1 139 aa15.12■□□□□ 0.01
CD44-203ENST00000278386 TRIM43Q96BQ3 446 aaPredicted RBP15.12■□□□□ 0.01
CD44-203ENST00000278386 EVI5LQ96CN4 794 aa15.12■□□□□ 0.01
CD44-203ENST00000278386 FAM161BQ96MY7 647 aa15.12■□□□□ 0.01
CD44-203ENST00000278386 RNF146Q9NTX7 359 aa15.12■□□□□ 0.01
CD44-203ENST00000278386 STXBP5LQ9Y2K9 1186 aa15.12■□□□□ 0.01
CD44-203ENST00000278386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
CD44-203ENST00000278386 MOXD2PA6NHM9 499 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 FOXP2O15409 715 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 RANBP6O60518 1105 aaKnown RBP15.11■□□□□ 0.01
CD44-203ENST00000278386 RAG1P15918 1043 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 ACLYP53396 1101 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 SHHQ15465 462 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 CCDC96Q2M329 555 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 VPS53Q5VIR6 699 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 CCDC174Q6PII3 467 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 RASGRP2Q7LDG7 609 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 NUP133Q8WUM0 1156 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 TSEN34Q9BSV6 310 aaKnown RBP15.11■□□□□ 0.01
CD44-203ENST00000278386 ABHD16BQ9H3Z7 469 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 SPC25Q9HBM1 224 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 TACC3Q9Y6A5 838 aa15.11■□□□□ 0.01
CD44-203ENST00000278386 MYADML2A6NDP7 307 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 NMT2O60551 498 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 DUSP11O75319 330 aaKnown RBP15.1■□□□□ 0.01
CD44-203ENST00000278386 ALAS1P13196 640 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 PDE1AP54750 535 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 CNTN2Q02246 1040 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 KCNA10Q16322 511 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 RRP12Q5JTH9 1297 aaKnown RBP15.1■□□□□ 0.01
CD44-203ENST00000278386 CCDC144CPQ8IYA2 1237 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 STAG1Q8WVM7 1258 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 FGD4Q96M96 766 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 AGBL1Q96MI9 1066 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 INCENPQ9NQS7 918 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 HELLSQ9NRZ9 838 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 TMEM39AQ9NV64 488 aa15.1■□□□□ 0.01
CD44-203ENST00000278386 DCDC2CA8MYV0 355 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 ADCY6O43306 1168 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 SNAP25P60880 206 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 TKFCQ3LXA3 575 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 KLHDC9Q8NEP7 349 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 VTI1AQ96AJ9 217 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 RNPC3Q96LT9 517 aaKnown RBP15.09■□□□□ 0.01
CD44-203ENST00000278386 FAM227BQ96M60 508 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 GLT1D1Q96MS3 346 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 TRERF1Q96PN7 1200 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 A1CFQ9NQ94 594 aaKnown RBP15.09■□□□□ 0.01
CD44-203ENST00000278386 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 ZNF536O15090 1300 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 MYH6P13533 1939 aa15.09■□□□□ 0.01
CD44-203ENST00000278386 A0A0D9SFI3 127 aa15.08■□□□□ 0
CD44-203ENST00000278386 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
CD44-203ENST00000278386 KIAA0355O15063 1070 aa15.08■□□□□ 0
CD44-203ENST00000278386 CST5P28325 142 aaPredicted RBP15.08■□□□□ 0
CD44-203ENST00000278386 IRX5P78411 483 aaPredicted RBP15.08■□□□□ 0
CD44-203ENST00000278386 FPGSQ05932 587 aa15.08■□□□□ 0
CD44-203ENST00000278386 HDAC1Q13547 482 aaPredicted RBP15.08■□□□□ 0
CD44-203ENST00000278386 FAM109BQ6ICB4 259 aaPredicted RBP15.08■□□□□ 0
CD44-203ENST00000278386 RCSD1Q6JBY9 416 aa15.08■□□□□ 0
CD44-203ENST00000278386 NOL8Q76FK4 1167 aaKnown RBP15.08■□□□□ 0
CD44-203ENST00000278386 PCSK9Q8NBP7 692 aaKnown RBP15.08■□□□□ 0
CD44-203ENST00000278386 DCAF4Q8WV16 495 aa15.08■□□□□ 0
CD44-203ENST00000278386 GUCD1Q96NT3 240 aa15.08■□□□□ 0
CD44-203ENST00000278386 LNPKQ9C0E8 428 aa15.08■□□□□ 0
CD44-203ENST00000278386 ANAPC4Q9UJX5 808 aa15.08■□□□□ 0
CD44-203ENST00000278386 CCPG1Q9ULG6 757 aa15.08■□□□□ 0
CD44-203ENST00000278386 PRR12Q9ULL5 1215 aa15.08■□□□□ 0
CD44-203ENST00000278386 MROH7Q68CQ1 1323 aa15.08■□□□□ 0
CD44-203ENST00000278386 DLL1O00548 723 aa15.07■□□□□ 0
CD44-203ENST00000278386 ORC4O43929 436 aa15.07■□□□□ 0
CD44-203ENST00000278386 PLA2G6O60733 806 aa15.07■□□□□ 0
CD44-203ENST00000278386 ASGR1P07306 291 aa15.07■□□□□ 0
CD44-203ENST00000278386 ITGB8P26012 769 aa15.07■□□□□ 0
CD44-203ENST00000278386 FAAP100Q0VG06 881 aa15.07■□□□□ 0
CD44-203ENST00000278386 MCMDC2Q4G0Z9 681 aa15.07■□□□□ 0
CD44-203ENST00000278386 NSMFQ6X4W1 530 aa15.07■□□□□ 0
CD44-203ENST00000278386 FAM133AQ8N9E0 248 aa15.07■□□□□ 0
CD44-203ENST00000278386 RILPL2Q969X0 211 aa15.07■□□□□ 0
CD44-203ENST00000278386 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
CD44-203ENST00000278386 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
CD44-203ENST00000278386 A0A0U1RQG5 324 aaPredicted RBP15.06■□□□□ 0
CD44-203ENST00000278386 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.06■□□□□ 0
CD44-203ENST00000278386 ASB14A6NK59 587 aa15.06■□□□□ 0
CD44-203ENST00000278386 GJA9P57773 515 aa15.06■□□□□ 0
CD44-203ENST00000278386 HAND2P61296 217 aa15.06■□□□□ 0
CD44-203ENST00000278386 TNFAIP2Q03169 654 aa15.06■□□□□ 0
CD44-203ENST00000278386 NMIQ13287 307 aaPredicted RBP15.06■□□□□ 0
CD44-203ENST00000278386 ALX1Q15699 326 aa15.06■□□□□ 0
CD44-203ENST00000278386 GNASQ5JWF2 1037 aa15.06■□□□□ 0
CD44-203ENST00000278386 CCSAPQ6IQ19 270 aaPredicted RBP15.06■□□□□ 0
CD44-203ENST00000278386 ANKRD33Q7Z3H0 272 aa15.06■□□□□ 0
CD44-203ENST00000278386 TLK2Q86UE8 772 aa15.06■□□□□ 0
CD44-203ENST00000278386 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
CD44-203ENST00000278386 TOX2Q96NM4 488 aa15.06■□□□□ 0
CD44-203ENST00000278386 KATNBL1Q9H079 304 aa15.06■□□□□ 0
CD44-203ENST00000278386 ELP1O95163 1332 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms