RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TRPC6Q9Y210 931 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 ATP2C2O75185 946 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 SPATA1Q5VX52 437 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 CCDC51Q96ER9 411 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 MASTLQ96GX5 879 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 PIGSQ96S52 555 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 IFIH1Q9BYX4 1025 aaKnown RBP12.47□□□□□ -0.41
USP6NL-201ENST00000277575 SUGCTQ9HAC7 445 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 KIAA1024Q9UPX6 916 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 M0QZ92 97 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 PPP6R2O75170 966 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 ERCC5P28715 1186 aaPredicted RBP12.47□□□□□ -0.41
USP6NL-201ENST00000277575 DNAJC21Q5F1R6 531 aaKnown RBP12.47□□□□□ -0.41
USP6NL-201ENST00000277575 ZNF365Q70YC5 407 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 RCOR1Q9UKL0 485 aa12.47□□□□□ -0.41
USP6NL-201ENST00000277575 UNC13BO14795 1591 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 LARGE1O95461 756 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 PRDX5P30044 214 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 SNX16P57768 344 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 TICAM2Q86XR7 235 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 CELF1Q92879 486 aaKnown RBP12.46□□□□□ -0.41
USP6NL-201ENST00000277575 GSDMAQ96QA5 445 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 SELENOSQ9BQE4 189 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 ISCA1Q9BUE6 129 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 NSRP1Q9H0G5 558 aaKnown RBP12.46□□□□□ -0.41
USP6NL-201ENST00000277575 LAD1O00515 517 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 ACTN4O43707 911 aaKnown RBP12.46□□□□□ -0.41
USP6NL-201ENST00000277575 SORBS3O60504 671 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 ARL1P40616 181 aaPredicted RBP12.46□□□□□ -0.41
USP6NL-201ENST00000277575 LRCH2Q5VUJ6 765 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 ZBTB8OSQ8IWT0 167 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 GOLGA5Q8TBA6 731 aa12.46□□□□□ -0.41
USP6NL-201ENST00000277575 TULP4Q9NRJ4 1543 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 K7ENM7 598 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 KCNQ2O43526 872 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 CYP2E1P05181 493 aaPredicted RBP12.46□□□□□ -0.42
USP6NL-201ENST00000277575 FERP16591 822 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 CCDC63Q8NA47 563 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 LINC00301Q8NCQ3 95 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 TBCKQ8TEA7 893 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 BEGAINQ9BUH8 593 aa12.46□□□□□ -0.42
USP6NL-201ENST00000277575 LSM14BQ9BX40 385 aaKnown RBP12.46□□□□□ -0.42
USP6NL-201ENST00000277575 MMP1P03956 469 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 CAPN2P17655 700 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 LIG4P49917 911 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 SLFNL1Q499Z3 407 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 RNF34Q969K3 372 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 COA7Q96BR5 231 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 FTOQ9C0B1 505 aaKnown RBP eCLIP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 RABGAP1Q9Y3P9 1069 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 FAM169AQ9Y6X4 670 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 COL15A1P39059 1388 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 RIOK3O14730 519 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 ADRA2BP18089 450 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 CDK8P49336 464 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 UBXN2AP68543 259 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 ADAM9Q13443 819 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 RPS6KA1Q15418 735 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 PEX26Q7Z412 305 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 FOXP4Q8IVH2 680 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 GJA10Q969M2 543 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 USTQ9Y2C2 406 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 CDHR2Q9BYE9 1310 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 NBPF26B4DH59 902 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 ZEB2O60315 1214 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 GCFC2P16383 781 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 TRIM28Q13263 835 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 NBPF10Q6P3W6 841 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 HDXQ7Z353 690 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 DGKHQ86XP1 1220 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 NBPF15Q8N660 670 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 UBLCP1Q8WVY7 318 aaPredicted RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 TTC14Q96N46 770 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 AIFM3Q96NN9 605 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 C21orf2O43822 256 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 KCTD2Q14681 263 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 ODR4Q5SWX8 454 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 CIAPIN1Q6FI81 312 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 RTKN2Q8IZC4 609 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 GPR161Q8N6U8 529 aaKnown RBP12.45□□□□□ -0.42
USP6NL-201ENST00000277575 CCDC127Q96BQ5 260 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 AK8Q96MA6 479 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 BRIP1Q9BX63 1249 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 CUEDC2Q9H467 287 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
USP6NL-201ENST00000277575 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
USP6NL-201ENST00000277575 PRPF6O94906 941 aaKnown RBP12.44□□□□□ -0.42
USP6NL-201ENST00000277575 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
USP6NL-201ENST00000277575 LARP4BQ92615 738 aaKnown RBP12.44□□□□□ -0.42
USP6NL-201ENST00000277575 MRFAP1L1Q96HT8 127 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 TRIM31Q9BZY9 425 aa12.44□□□□□ -0.42
USP6NL-201ENST00000277575 FAM204AQ9H8W3 233 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms