RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 FBXO11Q86XK2 927 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 TSPYL6Q8N831 410 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 MCOLN1Q9GZU1 580 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 ANKRD2Q9GZV1 360 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 STIM2Q9P246 746 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 MINPP1Q9UNW1 487 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
LRTM1-201ENST00000273286 PAPPA2Q9BXP8 1791 aa12.29□□□□□ -0.44
LRTM1-201ENST00000273286 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
LRTM1-201ENST00000273286 NF2P35240 595 aa12.29□□□□□ -0.44
LRTM1-201ENST00000273286 KIF23Q02241 960 aaPredicted RBP12.29□□□□□ -0.44
LRTM1-201ENST00000273286 PLA2G12BQ9BX93 195 aa12.29□□□□□ -0.44
LRTM1-201ENST00000273286 RBSNQ9H1K0 784 aa12.29□□□□□ -0.44
LRTM1-201ENST00000273286 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
LRTM1-201ENST00000273286 CASP8AP2Q9UKL3 1982 aa12.29□□□□□ -0.44
LRTM1-201ENST00000273286 UBE3BQ7Z3V4 1068 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 Q8N3U1 123 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 GPR152Q8TDT2 470 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 TSR2Q969E8 191 aaKnown RBP12.28□□□□□ -0.44
LRTM1-201ENST00000273286 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 GREM2Q9H772 168 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 AKAP11Q9UKA4 1901 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 GCKRQ14397 625 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
LRTM1-201ENST00000273286 DACT2Q5SW24 774 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
LRTM1-201ENST00000273286 JARID2Q92833 1246 aaPredicted RBP12.28□□□□□ -0.44
LRTM1-201ENST00000273286 RNF186Q9NXI6 227 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 SEPT3Q9UH03 358 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
LRTM1-201ENST00000273286 DLK2Q6UY11 383 aa12.27□□□□□ -0.45
LRTM1-201ENST00000273286 DNAAF4Q8WXU2 420 aa12.27□□□□□ -0.45
LRTM1-201ENST00000273286 ZNF804BA4D1E1 1349 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 ASTN2O75129 1339 aaPredicted RBP12.26□□□□□ -0.45
LRTM1-201ENST00000273286 ZBTB39O15060 712 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 TRPA1O75762 1119 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 CSF1RP07333 972 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 RASAL3Q86YV0 1011 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 APOBEC3FQ8IUX4 373 aaKnown RBP12.26□□□□□ -0.45
LRTM1-201ENST00000273286 WDR63Q8IWG1 891 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 CSRNP1Q96S65 589 aa12.26□□□□□ -0.45
LRTM1-201ENST00000273286 FNDC3AQ9Y2H6 1198 aaKnown RBP12.26□□□□□ -0.45
LRTM1-201ENST00000273286 COL1A1P02452 1464 aaPredicted RBP12.25□□□□□ -0.45
LRTM1-201ENST00000273286 WNT10BO00744 389 aa12.25□□□□□ -0.45
LRTM1-201ENST00000273286 DEAF1O75398 565 aaPredicted RBP12.25□□□□□ -0.45
LRTM1-201ENST00000273286 KCNJ4P48050 445 aa12.25□□□□□ -0.45
LRTM1-201ENST00000273286 ZMYM1Q5SVZ6 1142 aa12.25□□□□□ -0.45
LRTM1-201ENST00000273286 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
LRTM1-201ENST00000273286 CCDC82Q8N4S0 544 aa12.25□□□□□ -0.45
LRTM1-201ENST00000273286 OR13H1Q8NG92 308 aa12.25□□□□□ -0.45
LRTM1-201ENST00000273286 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
LRTM1-201ENST00000273286 PKN2Q16513 984 aaKnown RBP12.24□□□□□ -0.45
LRTM1-201ENST00000273286 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
LRTM1-201ENST00000273286 NOM1Q5C9Z4 860 aaKnown RBP12.24□□□□□ -0.45
LRTM1-201ENST00000273286 C15orf52Q6ZUT6 534 aaKnown RBP12.24□□□□□ -0.45
LRTM1-201ENST00000273286 ARMC9Q7Z3E5 817 aa12.24□□□□□ -0.45
LRTM1-201ENST00000273286 CTU1Q7Z7A3 348 aaKnown RBP12.24□□□□□ -0.45
LRTM1-201ENST00000273286 TP53INP1Q96A56 240 aa12.24□□□□□ -0.45
LRTM1-201ENST00000273286 SPEF2Q9C093 1822 aa12.24□□□□□ -0.45
LRTM1-201ENST00000273286 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 CASP7P55210 303 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 SREBF2Q12772 1141 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 IFIT5Q13325 482 aaKnown RBP12.23□□□□□ -0.45
LRTM1-201ENST00000273286 G2E3Q7L622 706 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 IL22RA1Q8N6P7 574 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 TRIM33Q9UPN9 1127 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 PPP2R3BQ9Y5P8 575 aa12.23□□□□□ -0.45
LRTM1-201ENST00000273286 UNCXA6NJT0 531 aa12.22□□□□□ -0.45
LRTM1-201ENST00000273286 CHRNDQ07001 517 aa12.22□□□□□ -0.45
LRTM1-201ENST00000273286 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
LRTM1-201ENST00000273286 ZNF804AQ7Z570 1209 aa12.22□□□□□ -0.45
LRTM1-201ENST00000273286 MRS2Q9HD23 443 aa12.22□□□□□ -0.45
LRTM1-201ENST00000273286 ZNF646O15015 1829 aaPredicted RBP12.21□□□□□ -0.45
LRTM1-201ENST00000273286 MYO1BO43795 1136 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 VAMP4O75379 141 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 H2AFB1P0C5Y9 115 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 H2AFB2P0C5Z0 115 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 TM4SF4P48230 202 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 INHBEP58166 350 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 FKBP1AP62942 108 aaKnown RBP12.21□□□□□ -0.45
LRTM1-201ENST00000273286 HYAL2Q12891 473 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 TTC39BQ5VTQ0 682 aaPredicted RBP12.21□□□□□ -0.45
LRTM1-201ENST00000273286 KIAA0825Q8IV33 1275 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 CD209Q9NNX6 404 aa12.21□□□□□ -0.45
LRTM1-201ENST00000273286 WTIPA6NIX2 430 aaPredicted RBP12.2□□□□□ -0.46
LRTM1-201ENST00000273286 UBE2Q2LH0YL09 131 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 DLL1O00548 723 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 ANP32CO43423 234 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 IREB2P48200 963 aaKnown RBP12.2□□□□□ -0.46
LRTM1-201ENST00000273286 DLGAP5Q15398 846 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 PRSS36Q5K4E3 855 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
LRTM1-201ENST00000273286 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 SASH1O94885 1247 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 NOS3P29474 1203 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 SCNN1AP37088 669 aa12.2□□□□□ -0.46
LRTM1-201ENST00000273286 ATCAYQ86WG3 371 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms