RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 HOXA10P31260 410 aaPredicted RBP11.4□□□□□ -0.58
CPNE9-201ENST00000273027 GUCY1A2P33402 732 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 PRPHP41219 470 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 HIRAP54198 1017 aaPredicted RBP11.4□□□□□ -0.58
CPNE9-201ENST00000273027 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 NR5A1Q13285 461 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 CUL4BQ13620 913 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 PFKFB3Q16875 520 aaPredicted RBP11.4□□□□□ -0.58
CPNE9-201ENST00000273027 CDKAL1Q5VV42 579 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 CTR9Q6PD62 1173 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 TMTC1Q8IUR5 882 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 DAGLBQ8NCG7 672 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 CCDC12Q8WUD4 166 aaPredicted RBP11.4□□□□□ -0.58
CPNE9-201ENST00000273027 CCDC47Q96A33 483 aaKnown RBP11.4□□□□□ -0.58
CPNE9-201ENST00000273027 PAGE5Q96GU1 130 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 RBM17Q96I25 401 aaKnown RBP11.4□□□□□ -0.58
CPNE9-201ENST00000273027 ABCF2Q9UG63 623 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 RWDD2AQ9UIY3 292 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 ZNRF3Q9ULT6 936 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 MINPP1Q9UNW1 487 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 TACC3Q9Y6A5 838 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
CPNE9-201ENST00000273027 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 BAZ2AQ9UIF9 1905 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 A0A087WWV3 80 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 H7C1D1 291 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 BMP6P22004 513 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 HIBADHP31937 336 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 PBX1P40424 430 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 NLRP5P59047 1200 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 RPS8P62241 208 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 KCNB1Q14721 858 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 ZNF658Q5TYW1 1059 aaPredicted RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 ISM2Q6H9L7 571 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 TMCO3Q6UWJ1 677 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 MIGA1Q8NAN2 632 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 WDR66Q8TBY9 1149 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 RABGGTAQ92696 567 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 DPF2Q92785 391 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 FAM84BQ96KN1 310 aaPredicted RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 LIMA1Q9UHB6 759 aaKnown RBP11.39□□□□□ -0.59
CPNE9-201ENST00000273027 LEMD3Q9Y2U8 911 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 ROBO3Q96MS0 1386 aa11.39□□□□□ -0.59
CPNE9-201ENST00000273027 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 hCG_1984214I3L0E3 225 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 RAD17O75943 681 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 URI1O94763 535 aaPredicted RBP11.38□□□□□ -0.59
CPNE9-201ENST00000273027 BAG3O95817 575 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 STIM1Q13586 685 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 ELF2Q15723 593 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 KMT5BQ4FZB7 885 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 TEX35Q5T0J7 233 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 ZNF713Q8N859 430 aaPredicted RBP11.38□□□□□ -0.59
CPNE9-201ENST00000273027 SYMPKQ92797 1274 aaKnown RBP11.38□□□□□ -0.59
CPNE9-201ENST00000273027 AK8Q96MA6 479 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
CPNE9-201ENST00000273027 RNF186Q9NXI6 227 aa11.38□□□□□ -0.59
CPNE9-201ENST00000273027 CNOT7Q9UIV1 285 aaKnown RBP11.38□□□□□ -0.59
CPNE9-201ENST00000273027 V9GY48 417 aaPredicted RBP11.38□□□□□ -0.59
CPNE9-201ENST00000273027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.37□□□□□ -0.59
CPNE9-201ENST00000273027 USP17L12C9JPN9 530 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 USP17L21D6R901 530 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 KIF5CO60282 957 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 TADA3O75528 432 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 PPP4CP60510 307 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 TNIP1Q15025 636 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 RGMBQ6NW40 437 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 FBXO38Q6PIJ6 1188 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 ZNF662Q6ZS27 426 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 RASGRP2Q7LDG7 609 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 BLIDQ8IZY5 108 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 PDILTQ8N807 584 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 RETREG2Q8NC44 543 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 TRPM4Q8TD43 1214 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 SDR42E1Q8WUS8 393 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 CCDC102AQ96A19 550 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 DHX58Q96C10 678 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 CCSER1Q9C0I3 900 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 KAT14Q9H8E8 782 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 INCENPQ9NQS7 918 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 INTS13Q9NVM9 706 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 VPS54Q9P1Q0 977 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 PRDM4Q9UKN5 801 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 MRFAP1Q9Y605 127 aa11.37□□□□□ -0.59
CPNE9-201ENST00000273027 A0A1W2PQC6 194 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 SHTN1A0MZ66 631 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 CCDC66A2RUB6 948 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 TSPY2A6NKD2 308 aa11.36□□□□□ -0.59
CPNE9-201ENST00000273027 FAM155AB1AL88 458 aaPredicted RBP11.36□□□□□ -0.59
CPNE9-201ENST00000273027 PPP1R3GB7ZBB8 358 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms