RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 KANK3Q6NY19 840 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 KRBA2Q6ZNG9 492 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 PAXIP1Q6ZW49 1069 aaPredicted RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 TMC6Q7Z403 805 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 ERCC4Q92889 916 aaPredicted RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 HOOK2Q96ED9 719 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 TRIM34Q9BYJ4 488 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 ARPP21Q9UBL0 812 aaPredicted RBP9.94□□□□□ -0.82
TRIM43-201ENST00000272395 DACH1Q9UI36 760 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 SERPINB13Q9UIV8 391 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 LAMB1P07942 1786 aa9.94□□□□□ -0.82
TRIM43-201ENST00000272395 PAPPA2Q9BXP8 1791 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 A0A087WWV3 80 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 BIN1O00499 593 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 TBC1D12O60347 775 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 GDF11O95390 407 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 SHMT1P34896 483 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 FKBP1BP68106 108 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 MAP3K9P80192 1104 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 MAP3K10Q02779 954 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 GABPAQ06546 454 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 PPARAQ07869 468 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 SBK1Q52WX2 424 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CT47A1Q5JQC4 288 aaPredicted RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CYP4F22Q6NT55 531 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CCDC84Q86UT8 332 aaPredicted RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 METTL16Q86W50 562 aaKnown RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 FCHSD1Q86WN1 690 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 FOXP4Q8IVH2 680 aaPredicted RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 AMOTL1Q8IY63 956 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 TRIML1Q8N9V2 468 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 MLKLQ8NB16 471 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 EHD4Q9H223 541 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 ELP3Q9H9T3 547 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 HERC5Q9UII4 1024 aaKnown RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 ZNF112Q9UJU3 913 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 TACC3Q9Y6A5 838 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 NAV1Q8NEY1 1877 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CDK5RAP2Q96SN8 1893 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 BAZ2AQ9UIF9 1905 aaKnown RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 USP27XA6NNY8 438 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 RXRAP19793 462 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 PTPREP23469 700 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 ZNF157P51786 506 aaPredicted RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 NT5DC1Q5TFE4 455 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 ARMCX5Q6P1M9 558 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CNNM3Q8NE01 707 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 NKX2-3Q8TAU0 364 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 ERO1AQ96HE7 468 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CCDC34Q96HJ3 373 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 UBAC1Q9BSL1 405 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 RNF26Q9BY78 433 aaPredicted RBP9.93□□□□□ -0.82
TRIM43-201ENST00000272395 SNCAIPQ9Y6H5 919 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 CEP350Q5VT06 3117 aa9.93□□□□□ -0.82
TRIM43-201ENST00000272395 SIPA1L1O43166 1804 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 FOCADQ5VW36 1801 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.92□□□□□ -0.82
TRIM43-201ENST00000272395 PRDM1O75626 825 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 BMP15O95972 392 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 XBP1P17861 261 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 GJA5P36382 358 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 CDK8P49336 464 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 UBASH3AP57075 661 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 MDM2Q00987 491 aaPredicted RBP9.92□□□□□ -0.82
TRIM43-201ENST00000272395 PNOCQ13519 176 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 LONRF3Q496Y0 759 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 E4F1Q66K89 784 aaPredicted RBP9.92□□□□□ -0.82
TRIM43-201ENST00000272395 C16orf86Q6ZW13 317 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 DIS3L2Q8IYB7 885 aaKnown RBP9.92□□□□□ -0.82
TRIM43-201ENST00000272395 ANKRD13AQ8IZ07 590 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 ZNF654Q8IZM8 581 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 FANCBQ8NB91 859 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 ESR2Q92731 530 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 ZMYND15Q9H091 742 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 HSD3B7Q9H2F3 369 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 CSADQ9Y600 493 aa9.92□□□□□ -0.82
TRIM43-201ENST00000272395 RASSF10A6NK89 507 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 SERPINC1P01008 464 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 CAP2P40123 477 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
TRIM43-201ENST00000272395 DEFB115Q30KQ5 88 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 RGMBQ6NW40 437 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 TATDN1Q6P1N9 297 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 RASAL3Q86YV0 1011 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 SCYL3Q8IZE3 742 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 SLC10A4Q96EP9 437 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 PPP1R13BQ96KQ4 1090 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 MYL10Q9BUA6 226 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 L2HGDHQ9H9P8 463 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 OGFRQ9NZT2 677 aa9.91□□□□□ -0.82
TRIM43-201ENST00000272395 FBXO2Q9UK22 296 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms