RNA–Protein interactions for RNA: ENST00000271588.8

HMCN1-201, Transcript of hemicentin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCN1, Length 18,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-201ENST00000271588 UPF3AQ9H1J1 476 aaKnown RBP5.4□□□□□ -1.55
HMCN1-201ENST00000271588 PCDH11XQ9BZA7 1347 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ZBTB7BO15156 539 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SLC12A2P55011 1212 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SYDE1Q6ZW31 735 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 APBB2Q92870 758 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TMEM60Q9H2L4 133 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ATP8A2Q9NTI2 1148 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 DNAJC17Q9NVM6 304 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ARHGEF25Q86VW2 580 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CCDC89Q8N998 374 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ARMC2Q8NEN0 867 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 FRMD8Q9BZ67 464 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 MAD1L1Q9Y6D9 718 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 YTHDC2Q9H6S0 1430 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CASP14P31944 242 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SMIM24O75264 130 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 KRT15P19012 456 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ARHGAP42A6NI28 874 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 C4BPBP20851 252 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CCT2P78371 535 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 PANK2Q9BZ23 570 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 OSBPL5Q9H0X9 879 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 USP40Q9NVE5 1235 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 IRAK4Q9NWZ3 460 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TRAF5O00463 557 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ZBED6P86452 979 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TMC4Q7Z404 712 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SPDL1Q96EA4 605 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 LRRC37BQ96QE4 947 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 THAP9Q9H5L6 903 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 EPN1Q9Y6I3 576 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 BEND3Q5T5X7 828 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 VPS37BQ9H9H4 285 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ARAP3Q8WWN8 1544 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 MAP3K7O43318 606 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 MRPS35P82673 323 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TMED1Q13445 227 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TTC38Q5R3I4 469 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 MAN1A2O60476 641 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 H2AFZP0C0S5 128 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 LONRF2Q1L5Z9 754 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 H2AFVQ71UI9 128 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SND1Q7KZF4 910 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CCDC8Q9H0W5 538 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 MAPK13O15264 365 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SERPINB2P05120 415 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 RANBP1P43487 201 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TEX11Q8IYF3 940 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 DHX58Q96C10 678 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 GEMIN8Q9NWZ8 242 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 BAIAP2L1Q9UHR4 511 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SPATA31E1Q6ZUB1 1445 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 HSPA1LP34931 641 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 GRM1Q13255 1194 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 FSCBQ5H9T9 825 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ALKBH8Q96BT7 664 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 RNF26Q9BY78 433 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 IL1RAPL1Q9NZN1 696 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CCDC105Q8IYK2 499 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ZNF513Q8N8E2 541 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 NEK9Q8TD19 979 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ZSWIM6Q9HCJ5 1215 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CDK12Q9NYV4 1490 aaPredicted RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ADGRF5Q8IZF2 1346 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 MAGEB6P1A0A0J9YX57 407 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 EXOC5O00471 708 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 APOA4P06727 396 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 ACTN1P12814 892 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SURF1Q15526 300 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 FNBP1Q96RU3 617 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 EPC1Q9H2F5 836 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 INTS9Q9NV88 658 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 CHL1O00533 1208 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 COG7P83436 770 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 DHX9Q08211 1270 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 SSH3Q8TE77 659 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 NBPF3Q9H094 633 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 C10orf88Q9H8K7 445 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 PAIP2BQ9ULR5 123 aaKnown RBP5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TRIM33Q9UPN9 1127 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 RIPOR2Q9Y4F9 1068 aa5.39□□□□□ -1.55
HMCN1-201ENST00000271588 TNKSO95271 1327 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 PARP1P09874 1014 aaKnown RBP5.38□□□□□ -1.55
HMCN1-201ENST00000271588 TMTC3Q6ZXV5 915 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 NOSTRINQ8IVI9 506 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 ZNF233A6NK53 670 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 EYA2O00167 538 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 PUM3Q15397 648 aaKnown RBP5.38□□□□□ -1.55
HMCN1-201ENST00000271588 SLITRK6Q9H5Y7 841 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 MORC2Q9Y6X9 1032 aaPredicted RBP5.38□□□□□ -1.55
HMCN1-201ENST00000271588 KRT10P13645 584 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 TTC13Q8NBP0 860 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 MRPL47Q9HD33 250 aaKnown RBP5.38□□□□□ -1.55
HMCN1-201ENST00000271588 TPX2Q9ULW0 747 aaKnown RBP5.38□□□□□ -1.55
HMCN1-201ENST00000271588 DNM3Q9UQ16 869 aa5.38□□□□□ -1.55
HMCN1-201ENST00000271588 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms