RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 TUBA8Q9NY65 449 aaPredicted RBP14.46□□□□□ -0.09
PRDM16-201ENST00000270722 EPS15L1Q9UBC2 864 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 EEF1DP29692 281 aaKnown RBP14.46□□□□□ -0.09
PRDM16-201ENST00000270722 CCDC93Q567U6 631 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ZBTB41Q5SVQ8 909 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 TMTC4Q5T4D3 741 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ARHGEF16Q5VV41 709 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 TMX3Q96JJ7 454 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 GPCPD1Q9NPB8 672 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 HCLS1P14317 486 aaPredicted RBP14.46□□□□□ -0.09
PRDM16-201ENST00000270722 LZICQ8WZA0 190 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 TRIM11Q96F44 468 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 COQ7Q99807 217 aa14.46□□□□□ -0.09
PRDM16-201ENST00000270722 ARPP21Q9UBL0 812 aaPredicted RBP14.46□□□□□ -0.09
PRDM16-201ENST00000270722 GCNT3O95395 438 aa14.46□□□□□ -0.1
PRDM16-201ENST00000270722 MAGEA9P43362 315 aa14.46□□□□□ -0.1
PRDM16-201ENST00000270722 RSRC2Q7L4I2 434 aaKnown RBP14.46□□□□□ -0.1
PRDM16-201ENST00000270722 DBNLQ9UJU6 430 aaKnown RBP14.46□□□□□ -0.1
PRDM16-201ENST00000270722 MCF2LO15068 1137 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 ST13P50502 369 aaKnown RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 PSMD2Q13200 908 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 KCTD2Q14681 263 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 PDXDC1Q6P996 788 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 DDX42Q86XP3 938 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 SRRM1Q8IYB3 904 aaKnown RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 NACC1Q96RE7 527 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 HOMER3Q9NSC5 361 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 NUDT18Q6ZVK8 323 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 KRT12Q99456 494 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 DDX21Q9NR30 783 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 PHLPP2Q6ZVD8 1323 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 DDX5P17844 614 aaKnown RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 PARD3BQ8TEW8 1205 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 LRWD1Q9UFC0 647 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 A0A087WUV0 522 aaPredicted RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 PLEKHG3A1L390 1219 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 PPIP5K2O43314 1243 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 RWDD3Q9Y3V2 267 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 EFCAB14O75071 495 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 ESRRBO95718 433 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 TTC4O95801 387 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 NT5C2P49902 561 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 POSTNQ15063 836 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 CCDC105Q8IYK2 499 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 ZNF653Q96CK0 615 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 NAPGQ99747 312 aaPredicted RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 TLR3O15455 904 aaKnown RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 STAT1P42224 750 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 RMI1Q9H9A7 625 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 DACT1Q9NYF0 836 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 SMIM23A6NLE4 172 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.45□□□□□ -0.1
PRDM16-201ENST00000270722 CFAP36Q96G28 342 aa14.45□□□□□ -0.1
PRDM16-201ENST00000270722 KRT4P19013 534 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 CIITAP33076 1130 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.44□□□□□ -0.1
PRDM16-201ENST00000270722 KIFC3Q9BVG8 833 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 METTL14Q9HCE5 456 aaKnown RBP14.44□□□□□ -0.1
PRDM16-201ENST00000270722 ZNF212Q9UDV6 495 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 POLE2P56282 527 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 PEX26Q7Z412 305 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 NFATC2IPQ8NCF5 419 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 ZNF518AQ6AHZ1 1483 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 CUTAO60888 179 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 PPP2R3AQ06190 1150 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 PAK1Q13153 545 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 JADE1Q6IE81 842 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 PODNQ7Z5L7 613 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 ZNF215Q9UL58 517 aaPredicted RBP14.44□□□□□ -0.1
PRDM16-201ENST00000270722 MX2P20592 715 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 GOLGA8FQ08AF8 430 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 GOLGA8DPQ0D2H9 430 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 PLBD2Q8NHP8 589 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 PNMA3Q9UL41 463 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 SYNRGQ9UMZ2 1314 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 TYRO3Q06418 890 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 IQCB1Q15051 598 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 CPXCR1Q8N123 301 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 MIGA1Q8NAN2 632 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 SNX29Q8TEQ0 813 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 RILPQ96NA2 401 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 RAB20Q9NX57 234 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 ASXL1Q8IXJ9 1541 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 NOS1P29475 1434 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 LIG4P49917 911 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 ANKRD35Q8N283 1001 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 APPBP2Q92624 585 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 CALR3Q96L12 384 aaKnown RBP14.44□□□□□ -0.1
PRDM16-201ENST00000270722 A6NJR5 290 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 USP14P54578 494 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 LPIN2Q92539 896 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 TRIM45Q9H8W5 580 aaPredicted RBP14.44□□□□□ -0.1
PRDM16-201ENST00000270722 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 TRIM17Q9Y577 477 aa14.44□□□□□ -0.1
PRDM16-201ENST00000270722 CNPY2Q9Y2B0 182 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 DTNBO60941 627 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 TMEM191BP0C7N4 346 aa14.43□□□□□ -0.1
PRDM16-201ENST00000270722 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
PRDM16-201ENST00000270722 MRPS15P82914 257 aaKnown RBP14.43□□□□□ -0.1
PRDM16-201ENST00000270722 MAGEF1Q9HAY2 307 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms