RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
COPS3-201ENST00000268717 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 FSIP1Q8NA03 581 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 GMCL1P1Q8NEA9 526 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 BEGAINQ9BUH8 593 aa17.59■□□□□ 0.41
COPS3-201ENST00000268717 UNCXA6NJT0 531 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 TRIM75PA6NK02 468 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 USP2O75604 605 aaPredicted RBP17.58■□□□□ 0.41
COPS3-201ENST00000268717 GOLGA8HP0CJ92 632 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 EEF2P13639 858 aaKnown RBP17.58■□□□□ 0.41
COPS3-201ENST00000268717 IREB2P48200 963 aaKnown RBP17.58■□□□□ 0.41
COPS3-201ENST00000268717 PPP1R18Q6NYC8 613 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 RASGRP2Q7LDG7 609 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 CLEC10AQ8IUN9 316 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 BLIDQ8IZY5 108 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 FUCA2Q9BTY2 467 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 ZMYND12Q9H0C1 365 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 TNMDQ9H2S6 317 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 GOLPH3LQ9H4A5 285 aa17.58■□□□□ 0.41
COPS3-201ENST00000268717 M0R2N6 131 aa17.58■□□□□ 0.4
COPS3-201ENST00000268717 CTCFP49711 727 aaPredicted RBP17.58■□□□□ 0.4
COPS3-201ENST00000268717 SHROOM1Q2M3G4 852 aaPredicted RBP17.58■□□□□ 0.4
COPS3-201ENST00000268717 FMR1NBQ8N0W7 255 aaPredicted RBP17.58■□□□□ 0.4
COPS3-201ENST00000268717 KRI1Q8N9T8 703 aaKnown RBP17.58■□□□□ 0.4
COPS3-201ENST00000268717 ZNF579Q8NAF0 562 aaKnown RBP17.58■□□□□ 0.4
COPS3-201ENST00000268717 GMCL1Q96IK5 515 aa17.58■□□□□ 0.4
COPS3-201ENST00000268717 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
COPS3-201ENST00000268717 KINO60870 393 aaKnown RBP17.57■□□□□ 0.4
COPS3-201ENST00000268717 PTPREP23469 700 aa17.57■□□□□ 0.4
COPS3-201ENST00000268717 GNA11P29992 359 aa17.57■□□□□ 0.4
COPS3-201ENST00000268717 SEPT2Q15019 361 aa17.57■□□□□ 0.4
COPS3-201ENST00000268717 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
COPS3-201ENST00000268717 HEATR3Q7Z4Q2 680 aa17.57■□□□□ 0.4
COPS3-201ENST00000268717 GPKOWQ92917 476 aaPredicted RBP eCLIP17.57■□□□□ 0.4
COPS3-201ENST00000268717 MTMR8Q96EF0 704 aa17.57■□□□□ 0.4
COPS3-201ENST00000268717 MYH4Q9Y623 1939 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 GH2P01242 217 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 RESP18Q5W5W9 173 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 TYW1BQ6NUM6 668 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 SIAH1Q8IUQ4 282 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 CLMNQ96JQ2 1002 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 GINM1Q9NU53 330 aa17.56■□□□□ 0.4
COPS3-201ENST00000268717 SRPRBQ9Y5M8 271 aaKnown RBP17.56■□□□□ 0.4
COPS3-201ENST00000268717 CA12O43570 354 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 GDF11O95390 407 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 CCDC192P0DO97 292 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
COPS3-201ENST00000268717 RRP1BQ14684 758 aaKnown RBP17.55■□□□□ 0.4
COPS3-201ENST00000268717 ANKRD13AQ8IZ07 590 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 PIBF1Q8WXW3 757 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 HOOK2Q96ED9 719 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 TIGD1Q96MW7 591 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 PIGSQ96S52 555 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 C6orf50Q9HD87 102 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 HPSEQ9Y251 543 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 PCDHB6Q9Y5E3 794 aa17.55■□□□□ 0.4
COPS3-201ENST00000268717 FRMPD2Q68DX3 1309 aaPredicted RBP17.55■□□□□ 0.4
COPS3-201ENST00000268717 PNMA6FA0A0J9YX94 578 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 MARCKSP29966 332 aaPredicted RBP17.54■□□□□ 0.4
COPS3-201ENST00000268717 NAPAP54920 295 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 ATP2B2Q01814 1243 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 EARS2Q5JPH6 523 aaKnown RBP17.54■□□□□ 0.4
COPS3-201ENST00000268717 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 COL13A1Q5TAT6 717 aaPredicted RBP17.54■□□□□ 0.4
COPS3-201ENST00000268717 SLFN13Q68D06 897 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 REM2Q8IYK8 340 aaPredicted RBP17.54■□□□□ 0.4
COPS3-201ENST00000268717 SLC10A4Q96EP9 437 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 RBSNQ9H1K0 784 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 FBXO2Q9UK22 296 aaPredicted RBP17.54■□□□□ 0.4
COPS3-201ENST00000268717 SLC1A4P43007 532 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 NDUFA8P51970 172 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 LBX1P52954 281 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 JAG1P78504 1218 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 SPRYD7Q5W111 196 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 ADGRF4Q8IZF3 695 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.54■□□□□ 0.4
COPS3-201ENST00000268717 FERMT2Q96AC1 680 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 UBA5Q9GZZ9 404 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 JMJD4Q9H9V9 463 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 ARHGEF10LQ9HCE6 1279 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 ZBTB21Q9ULJ3 1066 aa17.54■□□□□ 0.4
COPS3-201ENST00000268717 CAVIN2O95810 425 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 PFKFB1P16118 471 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 MKRN3Q13064 507 aaKnown RBP17.53■□□□□ 0.4
COPS3-201ENST00000268717 ORC2Q13416 577 aaPredicted RBP17.53■□□□□ 0.4
COPS3-201ENST00000268717 DCAF15Q66K64 600 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 SHC4Q6S5L8 630 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
COPS3-201ENST00000268717 PIK3AP1Q6ZUJ8 805 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 KRT25Q7Z3Z0 450 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 HOMER1Q86YM7 354 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 ELOA2Q8IYF1 753 aaPredicted RBP17.53■□□□□ 0.4
COPS3-201ENST00000268717 CPVLQ9H3G5 476 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 SH2D4AQ9H788 454 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 GPCPD1Q9NPB8 672 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 PRDM10Q9NQV6 1147 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 PCDHA6Q9UN73 950 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 PCDHA8Q9Y5H6 950 aa17.53■□□□□ 0.4
COPS3-201ENST00000268717 CCDC194A0A1B0GVG4 234 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms