RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 GOLGA8HP0CJ92 632 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 MAGEA9P43362 315 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 SLC7A5Q01650 507 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 HERC4Q5GLZ8 1057 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 GSTA5Q7RTV2 222 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 GSPT2Q8IYD1 628 aaKnown RBP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
VPS33A-201ENST00000267199 HOMER2Q9NSB8 354 aa12.79□□□□□ -0.36
VPS33A-201ENST00000267199 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 CYP2D7A0A087X1C5 515 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 NBPF26B4DH59 902 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 CASP1P29466 404 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 SCARF1Q14162 830 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 IQCB1Q15051 598 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 NBPF10Q6P3W6 841 aaKnown RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 NBPF15Q8N660 670 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 B4DLN1 442 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 H7C1D1 291 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 DNM2P50570 870 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 ASIC2Q16515 512 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 ADAT2Q7Z6V5 191 aaKnown RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 SWAP70Q9UH65 585 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 IKBKGQ9Y6K9 419 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 AP5Z1O43299 807 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 SRGAP2O75044 1071 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 FAM13AO94988 1023 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 RPN1P04843 607 aaKnown RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 PRPHP41219 470 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 TRAPPC3LQ5T215 181 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 MB21D2Q8IYB1 491 aaPredicted RBP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 RASGRP4Q8TDF6 673 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 DPF2Q92785 391 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 EPSTI1Q96J88 318 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 SALL3Q9BXA9 1300 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 LOC102724428A0A0B4J2F2 783 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 TADA3O75528 432 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 SIK1P57059 783 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 ATP11AP98196 1134 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 CALCRLQ16602 461 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 CYB5R4Q7L1T6 521 aa12.78□□□□□ -0.36
VPS33A-201ENST00000267199 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.78□□□□□ -0.36
VPS33A-201ENST00000267199 TCP1P17987 556 aaKnown RBP12.77□□□□□ -0.36
VPS33A-201ENST00000267199 MTF1Q14872 753 aa12.77□□□□□ -0.36
VPS33A-201ENST00000267199 PEX26Q7Z412 305 aa12.77□□□□□ -0.36
VPS33A-201ENST00000267199 CCDC84Q86UT8 332 aaPredicted RBP12.77□□□□□ -0.36
VPS33A-201ENST00000267199 IFT74Q96LB3 600 aa12.77□□□□□ -0.36
VPS33A-201ENST00000267199 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.36
VPS33A-201ENST00000267199 ZNF609O15014 1411 aa12.77□□□□□ -0.36
VPS33A-201ENST00000267199 PTPRUQ92729 1446 aa12.77□□□□□ -0.36
VPS33A-201ENST00000267199 SOS2Q07890 1332 aaPredicted RBP12.77□□□□□ -0.37
VPS33A-201ENST00000267199 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.37
VPS33A-201ENST00000267199 PPP1R14CQ8TAE6 165 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 VWDEQ8N2E2 1590 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 KLRF2D3W0D1 207 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 CETN3O15182 167 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 TECP42680 631 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
VPS33A-201ENST00000267199 FOXO4P98177 505 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 EHHADHQ08426 723 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 USPL1Q5W0Q7 1092 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 TADA2BQ86TJ2 420 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 ANKRD42Q8N9B4 389 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 EYA3Q99504 573 aa12.77□□□□□ -0.37
VPS33A-201ENST00000267199 DDAH1O94760 285 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 ADCY7P51828 1080 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 PDCLQ13371 301 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 GKAP1Q5VSY0 366 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 SFMBT2Q5VUG0 894 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 KRT12Q99456 494 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 CPSF2Q9P2I0 782 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 RFX7Q2KHR2 1363 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 RPAINQ86UA6 219 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 LZTS2Q9BRK4 669 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 EPB41L5Q9HCM4 733 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 SRPRBQ9Y5M8 271 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 RASSF7Q02833 373 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 IQCGQ9H095 443 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 GGA1Q9UJY5 639 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 SPOPO43791 374 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 RPL13P26373 211 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 CDC27P30260 824 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
VPS33A-201ENST00000267199 TRIM68Q6AZZ1 485 aa12.76□□□□□ -0.37
VPS33A-201ENST00000267199 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms