RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TCP11L1Q9NUJ3 509 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 RMND1Q9NWS8 449 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 MAD2L2Q9UI95 211 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 TTF2Q9UNY4 1162 aaKnown RBP14.04□□□□□ -0.16
BEST3-201ENST00000266661 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 KCNJ18B7U540 433 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 H7C1D1 291 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 N4BP3O15049 544 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 USP17L8P0C7I0 530 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 CDC25AP30304 524 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 CCT6AP40227 531 aaKnown RBP14.04□□□□□ -0.16
BEST3-201ENST00000266661 TRIM14Q14142 442 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 KCNJ12Q14500 433 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 MSANTD4Q8NCY6 345 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 LRRC15Q8TF66 581 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 CCSER1Q9C0I3 900 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 ANKZF1Q9H8Y5 726 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 DISC1Q9NRI5 854 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 RAB21Q9UL25 225 aa14.04□□□□□ -0.16
BEST3-201ENST00000266661 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 MAP2K7O14733 419 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 CYTH3O43739 400 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 KIF5CO60282 957 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 POLD1P28340 1107 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 CYP2C19P33261 490 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 USP5P45974 858 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 TFAP4Q01664 338 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 JAKMIP3Q5VZ66 844 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 ACRBPQ8NEB7 543 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 HNRNPLLQ8WVV9 542 aaKnown RBP14.03□□□□□ -0.16
BEST3-201ENST00000266661 VPS16Q9H269 839 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 TMEM60Q9H2L4 133 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 KBTBD4Q9NVX7 518 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 TAB2Q9NYJ8 693 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 PCDHA6Q9UN73 950 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 REXO2Q9Y3B8 237 aaKnown RBP14.03□□□□□ -0.16
BEST3-201ENST00000266661 PCDHA8Q9Y5H6 950 aa14.03□□□□□ -0.16
BEST3-201ENST00000266661 NRXN2Q9P2S2 1712 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 CCDC151A5D8V7 595 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 PMS1P54277 932 aaKnown RBP14.02□□□□□ -0.16
BEST3-201ENST00000266661 PPP4CP60510 307 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 BRD3Q15059 726 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 GALNT17Q6IS24 598 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 CYP26C1Q6V0L0 522 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 PNMA1Q8ND90 353 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 GPKOWQ92917 476 aaPredicted RBP eCLIP14.02□□□□□ -0.16
BEST3-201ENST00000266661 NLRP3Q96P20 1036 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 NYXQ9GZU5 481 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 KAT14Q9H8E8 782 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.02□□□□□ -0.16
BEST3-201ENST00000266661 MYO1AQ9UBC5 1043 aa14.02□□□□□ -0.16
BEST3-201ENST00000266661 A0A1W2PQC6 194 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 PALM3A6NDB9 673 aaPredicted RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 STXBP3O00186 592 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 RHOBTB3O94955 611 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 MYL1P05976 194 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 PARP1P09874 1014 aaKnown RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 PRPHP41219 470 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 CHMP4BP1P59074 171 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 AMPD2Q01433 879 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 ZNF569Q5MCW4 686 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 WWC2Q6AWC2 1192 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 NBPF5PQ86XG9 351 aaPredicted RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 SLC35F6Q8N357 371 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 MSL3Q8N5Y2 521 aaKnown RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 CEP112Q8N8E3 955 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 RASGRP4Q8TDF6 673 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 MCM9Q9NXL9 1143 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 BAZ2BQ9UIF8 2168 aaKnown RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 CCDC88AQ3V6T2 1871 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 FLT1P17948 1338 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 LGALS16A8MUM7 142 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 GNAQP50148 359 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 SPTY2D1Q68D10 685 aaPredicted RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 MB21D1Q8N884 522 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 GIMAP8Q8ND71 665 aaPredicted RBP14.01□□□□□ -0.17
BEST3-201ENST00000266661 NLGN2Q8NFZ4 835 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 DNAJC7Q99615 494 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 ARFGAP3Q9NP61 516 aa14.01□□□□□ -0.17
BEST3-201ENST00000266661 TNRC6CQ9HCJ0 1690 aaKnown RBP14□□□□□ -0.17
BEST3-201ENST00000266661 PP2D1A8MPX8 630 aa14□□□□□ -0.17
BEST3-201ENST00000266661 KRT9P35527 623 aa14□□□□□ -0.17
BEST3-201ENST00000266661 STAT6P42226 847 aa14□□□□□ -0.17
BEST3-201ENST00000266661 TUBB4BP68371 445 aa14□□□□□ -0.17
BEST3-201ENST00000266661 LONRF2Q1L5Z9 754 aa14□□□□□ -0.17
BEST3-201ENST00000266661 CCDC178Q5BJE1 867 aa14□□□□□ -0.17
BEST3-201ENST00000266661 TTI2Q6NXR4 508 aa14□□□□□ -0.17
BEST3-201ENST00000266661 DTHD1Q6ZMT9 781 aa14□□□□□ -0.17
BEST3-201ENST00000266661 DYNLL2Q96FJ2 89 aa14□□□□□ -0.17
BEST3-201ENST00000266661 CHP1Q99653 195 aa14□□□□□ -0.17
BEST3-201ENST00000266661 THAP9Q9H5L6 903 aa14□□□□□ -0.17
BEST3-201ENST00000266661 BARHL2Q9NY43 387 aa14□□□□□ -0.17
BEST3-201ENST00000266661 KIF13BQ9NQT8 1826 aa14□□□□□ -0.17
BEST3-201ENST00000266661 TTC26A0AVF1 554 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 TRIM49BA6NDI0 452 aa13.99□□□□□ -0.17
BEST3-201ENST00000266661 RASSF10A6NK89 507 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms