RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PSMC4P43686 418 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 NBR1Q14596 966 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 FBXL16Q8N461 479 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 CCDC82Q8N4S0 544 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 FANCBQ8NB91 859 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 AGBL1Q96MI9 1066 aa21.34■■□□□ 1.01
SDF4-201ENST00000263741 RANBP17Q9H2T7 1088 aaKnown RBP21.34■■□□□ 1.01
SDF4-201ENST00000263741 STK3Q13188 491 aa21.33■■□□□ 1.01
SDF4-201ENST00000263741 HOMER1Q86YM7 354 aa21.33■■□□□ 1.01
SDF4-201ENST00000263741 ERO1AQ96HE7 468 aa21.33■■□□□ 1.01
SDF4-201ENST00000263741 JMJD4Q9H9V9 463 aa21.33■■□□□ 1.01
SDF4-201ENST00000263741 HOMER2Q9NSB8 354 aa21.33■■□□□ 1.01
SDF4-201ENST00000263741 FMNL1O95466 1100 aaPredicted RBP21.33■■□□□ 1
SDF4-201ENST00000263741 CALM1P0DP23 149 aa21.33■■□□□ 1
SDF4-201ENST00000263741 CALM2P0DP24 149 aa21.33■■□□□ 1
SDF4-201ENST00000263741 CALM3P0DP25 149 aa21.33■■□□□ 1
SDF4-201ENST00000263741 CDC27P30260 824 aa21.33■■□□□ 1
SDF4-201ENST00000263741 CDC37Q16543 378 aaPredicted RBP21.33■■□□□ 1
SDF4-201ENST00000263741 RTN1Q16799 776 aa21.33■■□□□ 1
SDF4-201ENST00000263741 NCAPG2Q86XI2 1143 aa21.33■■□□□ 1
SDF4-201ENST00000263741 NCOA5Q9HCD5 579 aaKnown RBP21.33■■□□□ 1
SDF4-201ENST00000263741 ERCC3P19447 782 aa21.32■■□□□ 1
SDF4-201ENST00000263741 KIF5BP33176 963 aa21.32■■□□□ 1
SDF4-201ENST00000263741 STAT3P40763 770 aa21.32■■□□□ 1
SDF4-201ENST00000263741 METAP2P50579 478 aaKnown RBP eCLIP21.32■■□□□ 15e-7■■□□□ 11.7
SDF4-201ENST00000263741 CCT2P78371 535 aaKnown RBP21.32■■□□□ 1
SDF4-201ENST00000263741 CCAR1Q8IX12 1150 aaKnown RBP21.32■■□□□ 1
SDF4-201ENST00000263741 SRBD1Q8N5C6 995 aaKnown RBP21.32■■□□□ 1
SDF4-201ENST00000263741 TEX13BQ9BXU2 312 aa21.32■■□□□ 1
SDF4-201ENST00000263741 TPCN1Q9ULQ1 816 aa21.32■■□□□ 1
SDF4-201ENST00000263741 LCTP09848 1927 aa21.32■■□□□ 1
SDF4-201ENST00000263741 hCG_1642624A0A1W2PR95 340 aa21.32■■□□□ 1
SDF4-201ENST00000263741 TNPO2O14787 897 aaKnown RBP21.32■■□□□ 1
SDF4-201ENST00000263741 DTNBO60941 627 aa21.32■■□□□ 1
SDF4-201ENST00000263741 PPFIA3O75145 1194 aa21.32■■□□□ 1
SDF4-201ENST00000263741 PDIA3P30101 505 aaKnown RBP21.32■■□□□ 1
SDF4-201ENST00000263741 KIF22Q14807 665 aa21.32■■□□□ 1
SDF4-201ENST00000263741 MAP3K14Q99558 947 aa21.32■■□□□ 1
SDF4-201ENST00000263741 FAM217BQ9NTX9 383 aaPredicted RBP21.32■■□□□ 1
SDF4-201ENST00000263741 TRIM17Q9Y577 477 aa21.32■■□□□ 1
SDF4-201ENST00000263741 LARGE1O95461 756 aa21.31■■□□□ 1
SDF4-201ENST00000263741 FCGRTP55899 365 aa21.31■■□□□ 1
SDF4-201ENST00000263741 CCNA1P78396 465 aa21.31■■□□□ 1
SDF4-201ENST00000263741 USH1GQ495M9 461 aa21.31■■□□□ 1
SDF4-201ENST00000263741 TMTC3Q6ZXV5 915 aa21.31■■□□□ 1
SDF4-201ENST00000263741 CCPG1Q9ULG6 757 aa21.31■■□□□ 1
SDF4-201ENST00000263741 DEKP35659 375 aaKnown RBP21.3■■□□□ 1
SDF4-201ENST00000263741 QRICH1Q2TAL8 776 aa21.3■■□□□ 1
SDF4-201ENST00000263741 GPR142Q7Z601 462 aa21.3■■□□□ 1
SDF4-201ENST00000263741 PIGSQ96S52 555 aa21.3■■□□□ 1
SDF4-201ENST00000263741 CWC22Q9HCG8 908 aaKnown RBP21.3■■□□□ 1
SDF4-201ENST00000263741 ALAS1P13196 640 aa21.3■■□□□ 1
SDF4-201ENST00000263741 ADD1P35611 737 aaKnown RBP21.3■■□□□ 1
SDF4-201ENST00000263741 EVCP57679 992 aa21.3■■□□□ 1
SDF4-201ENST00000263741 OTOP1Q7RTM1 612 aa21.3■■□□□ 1
SDF4-201ENST00000263741 RIOX2Q8IUF8 465 aa21.3■■□□□ 1
SDF4-201ENST00000263741 GABRQQ9UN88 632 aa21.3■■□□□ 1
SDF4-201ENST00000263741 ZNF236Q9UL36 1845 aa21.3■■□□□ 1
SDF4-201ENST00000263741 CNTNAP5Q8WYK1 1306 aa21.29■■□□□ 1
SDF4-201ENST00000263741 PPP1R11O60927 126 aaPredicted RBP21.29■■□□□ 1
SDF4-201ENST00000263741 RIOX1Q9H6W3 641 aa21.29■■□□□ 1
SDF4-201ENST00000263741 PRDM10Q9NQV6 1147 aa21.29■■□□□ 1
SDF4-201ENST00000263741 NID2Q14112 1375 aa21.29■■□□□ 1
SDF4-201ENST00000263741 MCM3APO60318 1980 aa21.29■■□□□ 1
SDF4-201ENST00000263741 ICAM1P05362 532 aa21.28■■□□□ 1
SDF4-201ENST00000263741 PRKCZQ05513 592 aa21.28■■□□□ 1
SDF4-201ENST00000263741 ATP2A1O14983 1001 aa21.28■■□□□ 1
SDF4-201ENST00000263741 MAPK4P31152 587 aa21.28■■□□□ 1
SDF4-201ENST00000263741 RABEP1Q15276 862 aa21.28■■□□□ 1
SDF4-201ENST00000263741 MUM1L1Q5H9M0 696 aa21.28■■□□□ 1
SDF4-201ENST00000263741 SPZ1Q9BXG8 430 aa21.28■■□□□ 1
SDF4-201ENST00000263741 ALDH8A1Q9H2A2 487 aaPredicted RBP21.28■■□□□ 1
SDF4-201ENST00000263741 RNF146Q9NTX7 359 aa21.28■■□□□ 1
SDF4-201ENST00000263741 CD2BP2O95400 341 aaKnown RBP21.27■■□□□ 1
SDF4-201ENST00000263741 FDX1P10109 184 aa21.27■■□□□ 1
SDF4-201ENST00000263741 OAZ1P54368 228 aa21.27■■□□□ 1
SDF4-201ENST00000263741 PLEKHH3Q7Z736 793 aa21.27■■□□□ 1
SDF4-201ENST00000263741 RBM28Q9NW13 759 aaKnown RBP21.27■■□□□ 1
SDF4-201ENST00000263741 GNAQP50148 359 aa21.27■□□□□ 0.99
SDF4-201ENST00000263741 RCAN1P53805 252 aa21.27■□□□□ 0.99
SDF4-201ENST00000263741 NECAB1Q8N987 351 aa21.27■□□□□ 0.99
SDF4-201ENST00000263741 SHCBP1Q8NEM2 672 aa21.27■□□□□ 0.99
SDF4-201ENST00000263741 MTMR8Q96EF0 704 aa21.27■□□□□ 0.99
SDF4-201ENST00000263741 FUT2Q10981 343 aa21.26■□□□□ 0.99
SDF4-201ENST00000263741 ANKRD1Q15327 319 aa21.26■□□□□ 0.99
SDF4-201ENST00000263741 ME3Q16798 604 aa21.26■□□□□ 0.99
SDF4-201ENST00000263741 CTU1Q7Z7A3 348 aaKnown RBP21.26■□□□□ 0.99
SDF4-201ENST00000263741 COA7Q96BR5 231 aa21.26■□□□□ 0.99
SDF4-201ENST00000263741 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
SDF4-201ENST00000263741 TRERF1Q96PN7 1200 aa21.26■□□□□ 0.99
SDF4-201ENST00000263741 ZBTB5O15062 677 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 SLC25A27O95847 323 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 SCRN1Q12765 414 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 PHKBQ93100 1093 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 MROH8Q9H579 483 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 IVNS1ABPQ9Y6Y0 642 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 NFIBO00712 420 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 FLT3LGP49771 235 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 FBXO11Q86XK2 927 aa21.25■□□□□ 0.99
SDF4-201ENST00000263741 LZTS2Q9BRK4 669 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms