RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 TDRD7Q8NHU6 1098 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 N4BP2L2Q92802 583 aaPredicted RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 ZNF274Q96GC6 653 aaPredicted RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 NAP1L4Q99733 375 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 ABCB6Q9NP58 842 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 INTS9Q9NV88 658 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 STK10O94804 968 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 DLATP10515 647 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 DNM2P50570 870 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 MESDQ14696 234 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 BLIDQ8IZY5 108 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 ZSCAN10Q96SZ4 725 aaPredicted RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 DNAJC17Q9NVM6 304 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 ABCC4O15439 1325 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 NEURL1BA8MQ27 555 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 EXOC7Q9UPT5 735 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 EIF2AK4Q9P2K8 1649 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 SLC8A1P32418 973 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 IL1RL1Q01638 556 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 IFNL3Q8IZI9 196 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 IP6K1Q92551 441 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 SCYL1Q96KG9 808 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 MRPL46Q9H2W6 279 aaKnown RBP13.23□□□□□ -0.29
SMG6-201ENST00000263073 HAUS4Q9H6D7 363 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 ANTXR1Q9H6X2 564 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
SMG6-201ENST00000263073 WDR91A4D1P6 747 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 NSMFQ6X4W1 530 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 LPIN2Q92539 896 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 CCDC127Q96BQ5 260 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 RAB20Q9NX57 234 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
SMG6-201ENST00000263073 LGSNQ5TDP6 509 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 CCDC197Q8NCU1 140 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 SMYD2Q9NRG4 433 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 TNRQ92752 1358 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 GIPC1O14908 333 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 PFDN1O60925 122 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 ATF2P15336 505 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 BCAMP50895 628 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 PLTPP55058 493 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 POLE2P56282 527 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 CYP4A11Q02928 519 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 NNTQ13423 1086 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 PPM1KQ8N3J5 372 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 LRRC8CQ8TDW0 803 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 GJA10Q969M2 543 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 CEP170Q5SW79 1584 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 ATP1A3P13637 1013 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
SMG6-201ENST00000263073 ADAM9Q13443 819 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 PHLDB3Q6NSJ2 640 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 SPDL1Q96EA4 605 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 ANLNQ9NQW6 1124 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 FAF1Q9UNN5 650 aaPredicted RBP13.22□□□□□ -0.29
SMG6-201ENST00000263073 KDRP35968 1356 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 M0R2C6 588 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 GYG1P46976 350 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 KRT81Q14533 505 aa13.22□□□□□ -0.29
SMG6-201ENST00000263073 ABCC2Q92887 1545 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 IBTKQ9P2D0 1353 aaPredicted RBP13.21□□□□□ -0.29
SMG6-201ENST00000263073 TNKSO95271 1327 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 SRGAP2O75044 1071 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 TUBGCP2Q9BSJ2 902 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 GJA3Q9Y6H8 435 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 TRPM2O94759 1503 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 LRRD1A4D1F6 860 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 EIF4A1P60842 406 aaKnown RBP13.21□□□□□ -0.29
SMG6-201ENST00000263073 CROCCP2Q86T23 111 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 PPP4R1Q8TF05 950 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
SMG6-201ENST00000263073 XAB2Q9HCS7 855 aaKnown RBP13.21□□□□□ -0.29
SMG6-201ENST00000263073 MAD1L1Q9Y6D9 718 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 TCP1P17987 556 aaKnown RBP13.21□□□□□ -0.29
SMG6-201ENST00000263073 CDC25BP30305 580 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 TMED2Q15363 201 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 CYP4F22Q6NT55 531 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.29
SMG6-201ENST00000263073 TARBP1Q13395 1621 aaKnown RBP13.21□□□□□ -0.29
SMG6-201ENST00000263073 ZBTB22O15209 634 aa13.21□□□□□ -0.3
SMG6-201ENST00000263073 TRPA1O75762 1119 aa13.21□□□□□ -0.3
SMG6-201ENST00000263073 PRPF6O94906 941 aaKnown RBP13.21□□□□□ -0.3
SMG6-201ENST00000263073 ADORA1P30542 326 aa13.21□□□□□ -0.3
SMG6-201ENST00000263073 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.3
SMG6-201ENST00000263073 K7ENM7 598 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 CYP27A1Q02318 531 aa13.2□□□□□ -0.3
SMG6-201ENST00000263073 DACT3Q96B18 629 aaPredicted RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
SMG6-201ENST00000263073 SLC52A2Q9HAB3 445 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms