RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 TPD52L1Q16890 204 aaPredicted RBP14.65□□□□□ -0.06
SPTLC1-201ENST00000262554 REXO1Q8N1G1 1221 aaKnown RBP14.65□□□□□ -0.06
SPTLC1-201ENST00000262554 DPF2Q92785 391 aa14.65□□□□□ -0.06
SPTLC1-201ENST00000262554 TMEM60Q9H2L4 133 aa14.65□□□□□ -0.06
SPTLC1-201ENST00000262554 ZNF18P17022 549 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 CASP1P29466 404 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 ZNF543Q08ER8 600 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 ORC2Q13416 577 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 CC2D2BQ6DHV5 1058 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 ARMCX5Q6P1M9 558 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 NEK8Q86SG6 692 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 CLEC10AQ8IUN9 316 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 VSTM4Q8IW00 320 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 TRMT44Q8IYL2 757 aaKnown RBP14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 SUPT20HQ8NEM7 779 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 MYRIPQ8NFW9 859 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 RASSF8Q8NHQ8 419 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 IDI2Q9BXS1 227 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 ANO8Q9HCE9 1232 aaPredicted RBP14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 SERPINA10Q9UK55 444 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 SIPA1L1O43166 1804 aa14.64□□□□□ -0.07
SPTLC1-201ENST00000262554 CCNT1O60563 726 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 UBA7P41226 1012 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 ADCY7P51828 1080 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 LETM2Q2VYF4 491 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 GPATCH4Q5T3I0 446 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 SPATA1Q5VX52 437 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 STAMQ92783 540 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 DISC1Q9NRI5 854 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 RMND1Q9NWS8 449 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 PI4KBQ9UBF8 816 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 SYNRGQ9UMZ2 1314 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 OR52Z1P0C646 297 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 ATP2B2Q01814 1243 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 TCP10Q12799 353 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 CUL4BQ13620 913 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 KARSQ15046 597 aaKnown RBP14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 AOC3Q16853 763 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 RRAGBQ5VZM2 374 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 PPP1R18Q6NYC8 613 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 ZFPM1Q8IX07 1006 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 AK8Q96MA6 479 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 C16orf45Q96MC5 204 aaPredicted RBP14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 TRIM34Q9BYJ4 488 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 CCSER1Q9C0I3 900 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 BLZF1Q9H2G9 400 aa14.63□□□□□ -0.07
SPTLC1-201ENST00000262554 PNMA6FA0A0J9YX94 578 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 DYNC1I1O14576 645 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 CDC25AP30304 524 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 CACNB3P54284 484 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 CCDC96Q2M329 555 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 HSP90AA4PQ58FG1 418 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 KLHL10Q6JEL2 608 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 ZSCAN29Q8IWY8 852 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 C7orf43Q8WVR3 580 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 MED15Q96RN5 788 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 KCND1Q9NSA2 647 aa14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 BIN2Q9UBW5 565 aaPredicted RBP14.62□□□□□ -0.07
SPTLC1-201ENST00000262554 PPP1R3GB7ZBB8 358 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 TNNT1P13805 278 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 EN1Q05925 392 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 JAKMIP3Q5VZ66 844 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 ADGRF4Q8IZF3 695 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 TBCKQ8TEA7 893 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 COA7Q96BR5 231 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 CAMKK2Q96RR4 588 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 MTRQ99707 1265 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 SAMSN1Q9NSI8 373 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 PCDHAC2Q9Y5I4 1007 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 DDTLA6NHG4 134 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 TMEM232C9JQI7 657 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 RPN1P04843 607 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 MYL1P05976 194 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 KCNJ6P48051 423 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 CERKLQ49MI3 558 aaPredicted RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 CCAR2Q8N163 923 aaKnown RBP14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 CCDC112Q8NEF3 446 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 TMEM260Q9NX78 707 aa14.61□□□□□ -0.07
SPTLC1-201ENST00000262554 PP2D1A8MPX8 630 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 STX17P56962 302 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 ZNF658Q5TYW1 1059 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 SMYD4Q8IYR2 804 aaPredicted RBP14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 KANSL2Q9H9L4 492 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 MAGEF1Q9HAY2 307 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 INTS13Q9NVM9 706 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 NYAP2Q9P242 653 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 CTNND2Q9UQB3 1225 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 PSME4Q14997 1843 aa14.6□□□□□ -0.07
SPTLC1-201ENST00000262554 PPIP5K2O43314 1243 aa14.59□□□□□ -0.07
SPTLC1-201ENST00000262554 PTPN14Q15678 1187 aa14.59□□□□□ -0.07
SPTLC1-201ENST00000262554 GRIPAP1Q4V328 841 aa14.59□□□□□ -0.07
SPTLC1-201ENST00000262554 TTBK2Q6IQ55 1244 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms