RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 GJA3Q9Y6H8 435 aa9.21□□□□□ -0.94
PTPN3-201ENST00000262539 CRKP46108 304 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 CDC37Q16543 378 aaPredicted RBP9.2□□□□□ -0.94
PTPN3-201ENST00000262539 CBX8Q9HC52 389 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 MACROD2A1Z1Q3 448 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 TBCAO75347 108 aaKnown RBP9.2□□□□□ -0.94
PTPN3-201ENST00000262539 PABPC4Q13310 644 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPN3-201ENST00000262539 DIXDC1Q155Q3 683 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 CAMK4Q16566 473 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 N4BP2Q86UW6 1770 aaPredicted RBP9.2□□□□□ -0.94
PTPN3-201ENST00000262539 ZBTB5O15062 677 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 HPSEQ9Y251 543 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 A0A1B0GVL5 298 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 TNNT1P13805 278 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 SUPT20HL1Q3ZLR7 823 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 GBP3Q9H0R5 595 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 STAMBPO95630 424 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 BMP3P12645 472 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 NOP2P46087 812 aaKnown RBP9.2□□□□□ -0.94
PTPN3-201ENST00000262539 UBASH3AP57075 661 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 DALRD3Q5D0E6 543 aaKnown RBP9.2□□□□□ -0.94
PTPN3-201ENST00000262539 FAM173BQ6P4H8 233 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 DPF2Q92785 391 aa9.2□□□□□ -0.94
PTPN3-201ENST00000262539 CTDNEP1O95476 244 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 MARCKSP29966 332 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-201ENST00000262539 VWA3BQ502W6 1294 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 EP400NLQ6ZTU2 488 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 PIK3AP1Q6ZUJ8 805 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 MKL1Q969V6 931 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 PCDHA5Q9Y5H7 936 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 CD2APQ9Y5K6 639 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 PICALMQ13492 652 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 PTPN14Q15678 1187 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 FBXO41Q8TF61 875 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 METTL14Q9HCE5 456 aaKnown RBP9.19□□□□□ -0.94
PTPN3-201ENST00000262539 FBXO40Q9UH90 709 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 LMAN1P49257 510 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 ZNF543Q08ER8 600 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 HS2ST1Q7LGA3 356 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 GAS2L3Q86XJ1 694 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 FBXO11Q86XK2 927 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 TMTC1Q8IUR5 882 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 SYCP3Q8IZU3 236 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 GMCL1Q96IK5 515 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 VPS54Q9P1Q0 977 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 RIMBP2O15034 1052 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 N4BP3O15049 544 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 CNTNAP5Q8WYK1 1306 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 CYLC1P35663 651 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-201ENST00000262539 TKFCQ3LXA3 575 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 TAF3Q5VWG9 929 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 MRVI1Q9Y6F6 885 aa9.19□□□□□ -0.94
PTPN3-201ENST00000262539 MCM3P25205 808 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 KRT83P78385 493 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 COL23A1Q86Y22 540 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-201ENST00000262539 AOPEPQ8N6M6 819 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 RIOX1Q9H6W3 641 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 PSTPIP2Q9H939 334 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 NFE2L3Q9Y4A8 694 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 LRP5O75197 1615 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 ASIC1P78348 528 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 C5P01031 1676 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 GAP43P17677 238 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 CDC27P30260 824 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 ST3GAL1Q11201 340 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 OTUD7BQ6GQQ9 843 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 ZKSCAN3Q9BRR0 538 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 MTFR1LQ9H019 292 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 KCND2Q9NZV8 630 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 ECE2O60344 883 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 ZBED4O75132 1171 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 USP8P40818 1118 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 PAK1Q13153 545 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 PTPAQ15257 358 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 CCDC186Q7Z3E2 898 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 DHX58Q96C10 678 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 TRIM47Q96LD4 638 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 STX10O60499 249 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 PLA2G6O60733 806 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 USO1O60763 962 aaKnown RBP9.18□□□□□ -0.94
PTPN3-201ENST00000262539 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 PGBD1Q96JS3 809 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 MYL10Q9BUA6 226 aa9.18□□□□□ -0.94
PTPN3-201ENST00000262539 DYNC1I1O14576 645 aa9.17□□□□□ -0.94
PTPN3-201ENST00000262539 PTGDRQ13258 359 aa9.17□□□□□ -0.94
PTPN3-201ENST00000262539 NOLC1Q14978 699 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTPN3-201ENST00000262539 APOBEC3FQ8IUX4 373 aaKnown RBP9.17□□□□□ -0.94
PTPN3-201ENST00000262539 RBM46Q8TBY0 533 aaKnown RBP9.17□□□□□ -0.94
PTPN3-201ENST00000262539 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-201ENST00000262539 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
PTPN3-201ENST00000262539 ANXA13P27216 316 aa9.17□□□□□ -0.94
PTPN3-201ENST00000262539 DNM2P50570 870 aa9.17□□□□□ -0.94
PTPN3-201ENST00000262539 PROM2Q8N271 834 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms