RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RAD50Q92878 1312 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 MYADML2A6NDP7 307 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 ARVCFO00192 962 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 TLR3O15455 904 aaKnown RBP15.74■□□□□ 0.11
SGCA-201ENST00000262018 FLOT1O75955 427 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 CCSAPQ6IQ19 270 aaPredicted RBP15.74■□□□□ 0.11
SGCA-201ENST00000262018 SNX21Q969T3 373 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 FSD1Q9BTV5 496 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 EHD4Q9H223 541 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 FAM184BQ9ULE4 1060 aa15.74■□□□□ 0.11
SGCA-201ENST00000262018 LRRC37A2A6NM11 1700 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
SGCA-201ENST00000262018 A0A1W2PRG0 241 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 PI4K2BG5E9Z4 385 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 SLC25A27O95847 323 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 CYP2E1P05181 493 aaPredicted RBP15.73■□□□□ 0.11
SGCA-201ENST00000262018 ZAP70P43403 619 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 IRX5P78411 483 aaPredicted RBP15.73■□□□□ 0.11
SGCA-201ENST00000262018 KCTD2Q14681 263 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 ZNF792Q3KQV3 632 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 CWC27Q6UX04 472 aaKnown RBP15.73■□□□□ 0.11
SGCA-201ENST00000262018 TTC6Q86TZ1 520 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 IL17RAQ96F46 866 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 PCDHA11Q9Y5I1 949 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 SLC4A7Q9Y6M7 1214 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 A0A0G2JMZ2 1700 aa15.73■□□□□ 0.11
SGCA-201ENST00000262018 ZNFX1Q9P2E3 1918 aaKnown RBP15.72■□□□□ 0.11
SGCA-201ENST00000262018 MPHOSPH10O00566 681 aaKnown RBP15.72■□□□□ 0.11
SGCA-201ENST00000262018 IGSF3O75054 1194 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 ASGR1P07306 291 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
SGCA-201ENST00000262018 SHMT1P34896 483 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 SLC4A3P48751 1232 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 TMEM132BQ14DG7 1078 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 RABEP1Q15276 862 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 KIAA1755Q5JYT7 1200 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 KRT40Q6A162 431 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 HLA-CQ95604 372 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 DNAJC2Q99543 621 aaKnown RBP15.72■□□□□ 0.11
SGCA-201ENST00000262018 CERS4Q9HA82 394 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
SGCA-201ENST00000262018 REV3LO60673 3130 aa15.72■□□□□ 0.11
SGCA-201ENST00000262018 POU3F3P20264 500 aaPredicted RBP15.71■□□□□ 0.11
SGCA-201ENST00000262018 CYP7A1P22680 504 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 MCCP23508 829 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 TTF1Q15361 905 aaPredicted RBP15.71■□□□□ 0.11
SGCA-201ENST00000262018 KBTBD3Q8NAB2 608 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 MIGA1Q8NAN2 632 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 PCSK9Q8NBP7 692 aaKnown RBP15.71■□□□□ 0.11
SGCA-201ENST00000262018 UIMC1Q96RL1 719 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 LSG1Q9H089 658 aaKnown RBP15.71■□□□□ 0.11
SGCA-201ENST00000262018 CD320Q9NPF0 282 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 ZHX1Q9UKY1 873 aaPredicted RBP15.71■□□□□ 0.11
SGCA-201ENST00000262018 MYH1P12882 1939 aa15.71■□□□□ 0.11
SGCA-201ENST00000262018 UMODL1Q5DID0 1318 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 XIRP2A4UGR9 3374 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 ZBBXA8MT70 800 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 PRR33A8MZF0 331 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 DUSP11O75319 330 aaKnown RBP15.7■□□□□ 0.1
SGCA-201ENST00000262018 CCL23P55773 120 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 ANAPC15P60006 121 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 NMIQ13287 307 aaPredicted RBP15.7■□□□□ 0.1
SGCA-201ENST00000262018 HIPK3Q9H422 1215 aa15.7■□□□□ 0.1
SGCA-201ENST00000262018 GOLIM4O00461 696 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 ATP2A2P16615 1042 aaKnown RBP15.69■□□□□ 0.1
SGCA-201ENST00000262018 CST5P28325 142 aaPredicted RBP15.69■□□□□ 0.1
SGCA-201ENST00000262018 HSPA4P34932 840 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 PLCD1P51178 756 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 KIAA1211Q6ZU35 1233 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 SPICE1Q8N0Z3 855 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 FAM227BQ96M60 508 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 SPC25Q9HBM1 224 aa15.69■□□□□ 0.1
SGCA-201ENST00000262018 PIH1D3Q9NQM4 214 aaKnown RBP15.69■□□□□ 0.1
SGCA-201ENST00000262018 EPOPA6NHQ4 379 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 CD4P01730 458 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 NHLH1Q02575 133 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 GNASQ5JWF2 1037 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 TMED8Q6PL24 325 aaPredicted RBP15.68■□□□□ 0.1
SGCA-201ENST00000262018 RIOX2Q8IUF8 465 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 HSCBQ8IWL3 235 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 ANTXR1Q9H6X2 564 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 A0A0D9SFI3 127 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 IDH1O75874 414 aaKnown RBP15.68■□□□□ 0.1
SGCA-201ENST00000262018 SNAI1O95863 264 aaPredicted RBP15.68■□□□□ 0.1
SGCA-201ENST00000262018 CA3P07451 260 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 TMEM67Q5HYA8 995 aa15.68■□□□□ 0.1
SGCA-201ENST00000262018 MYH7P12883 1935 aa15.67■□□□□ 0.1
SGCA-201ENST00000262018 POLR3DP05423 398 aaPredicted RBP15.67■□□□□ 0.1
SGCA-201ENST00000262018 STAT3P40763 770 aa15.67■□□□□ 0.1
SGCA-201ENST00000262018 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
SGCA-201ENST00000262018 ARNTL2Q8WYA1 636 aa15.67■□□□□ 0.1
SGCA-201ENST00000262018 CCDC171Q6TFL3 1326 aa15.66■□□□□ 0.1
SGCA-201ENST00000262018 ADCY6O43306 1168 aa15.66■□□□□ 0.1
SGCA-201ENST00000262018 GJA9P57773 515 aa15.66■□□□□ 0.1
SGCA-201ENST00000262018 PTH1RQ03431 593 aa15.66■□□□□ 0.1
SGCA-201ENST00000262018 CSPP1Q1MSJ5 1256 aa15.66■□□□□ 0.1
SGCA-201ENST00000262018 CERS3Q8IU89 383 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms