RNA–Protein interactions for RNA: ENST00000260649.10

SLC3A1-201, Transcript of solute carrier family 3 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC3A1, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-201ENST00000260649 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 PLCG1P19174 1290 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 CASQ1P31415 396 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 SLC16A2P36021 539 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 KCNJ12Q14500 433 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 CCDC178Q5BJE1 867 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 ZNF658Q5TYW1 1059 aaPredicted RBP12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 ARL6IP4Q66PJ3 421 aaKnown RBP12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 ANKS1AQ92625 1134 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 GJA10Q969M2 543 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 BBOX1O75936 387 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 ERCC3P19447 782 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 HSPA1LP34931 641 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 KCNJ6P48051 423 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 NONOQ15233 471 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 ARHGAP29Q52LW3 1261 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 CABP7Q86V35 215 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 KCNQ5Q9NR82 932 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 PCDHAC2Q9Y5I4 1007 aa12.78□□□□□ -0.36
SLC3A1-201ENST00000260649 TAF1LQ8IZX4 1826 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 ROBO3Q96MS0 1386 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 NHSQ6T4R5 1651 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 POLRMTO00411 1230 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 GYPCP04921 128 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 COPB1P53618 953 aaKnown RBP12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 UBXN1Q04323 297 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 POTEDQ86YR6 584 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 CERS5Q8N5B7 392 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 ACRBPQ8NEB7 543 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 ZMYND15Q9H091 742 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 C6orf50Q9HD87 102 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 TCP11L1Q9NUJ3 509 aa12.77□□□□□ -0.36
SLC3A1-201ENST00000260649 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 ABL1P00519 1130 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 TCP10Q12799 353 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 TTBK2Q6IQ55 1244 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 CERKQ8TCT0 537 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 CCDC12Q8WUD4 166 aaPredicted RBP12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 TRIM47Q96LD4 638 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 SRRTQ9BXP5 876 aaKnown RBP12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 L2HGDHQ9H9P8 463 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
SLC3A1-201ENST00000260649 OR52Z1P0C646 297 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 PLCG2P16885 1265 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 UBE2SQ16763 222 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 SHROOM1Q2M3G4 852 aaPredicted RBP12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 CTAGE1Q96RT6 745 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 RWDD2AQ9UIY3 292 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 MAST2Q6P0Q8 1798 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 NAV1Q8NEY1 1877 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 MFAP3LO75121 409 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 ADRA2BP18089 450 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 ASIC1P78348 528 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 SYCP1Q15431 976 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 ZNF397Q8NF99 534 aaPredicted RBP12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 UBXN4Q92575 508 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 ZMYND12Q9H0C1 365 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 DBNDD1Q9H9R9 158 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 RMND1Q9NWS8 449 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 PHLPP2Q6ZVD8 1323 aa12.76□□□□□ -0.37
SLC3A1-201ENST00000260649 PDHBP11177 359 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 FCER1AP12319 257 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TNNI2P48788 182 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 CCDC96Q2M329 555 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 KCTD1Q719H9 257 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 NEK8Q86SG6 692 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 REXO1Q8N1G1 1221 aaKnown RBP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TRPC5Q9UL62 973 aaPredicted RBP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TDP2O95551 362 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TFRCP02786 760 aaKnown RBP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 CCDC175P0C221 793 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 RBM5P52756 815 aaKnown RBP eCLIP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 PDE4DQ08499 809 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TEX35Q5T0J7 233 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 DYMQ7RTS9 669 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 SLF2Q8IX21 1173 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 ANKRD20A12PQ8NF67 263 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 MORC2Q9Y6X9 1032 aaPredicted RBP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TPM1P09493 284 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 GNA11P29992 359 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 PBX1P40424 430 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 NFIAQ12857 509 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 C15orf52Q6ZUT6 534 aaKnown RBP12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 KRT25Q7Z3Z0 450 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 ZFPM1Q8IX07 1006 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 PROM2Q8N271 834 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 TBC1D22AQ8WUA7 517 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 MTMR4Q9NYA4 1195 aa12.75□□□□□ -0.37
SLC3A1-201ENST00000260649 POTEMA6NI47 508 aa12.74□□□□□ -0.37
SLC3A1-201ENST00000260649 KRT9P35527 623 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms