RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 AIFM3Q96NN9 605 aa18.29■□□□□ 0.52
CCDC90B-201ENST00000260054 IPO9Q96P70 1041 aaKnown RBP18.29■□□□□ 0.52
CCDC90B-201ENST00000260054 SLC38A10Q9HBR0 1119 aa18.29■□□□□ 0.52
CCDC90B-201ENST00000260054 PNMA6FA0A0J9YX94 578 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 DEXIO95424 95 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 AKAP17AQ02040 695 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 PFKFB3Q16875 520 aaPredicted RBP18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 REPS2Q8NFH8 660 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 SEC63Q9UGP8 760 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 PNMA3Q9UL41 463 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 SCG2P13521 617 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 CCDC174Q6PII3 467 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 LBX2Q6XYB7 198 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 RBM27Q9P2N5 1060 aaKnown RBP18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 ZNF536O15090 1300 aa18.28■□□□□ 0.52
CCDC90B-201ENST00000260054 GPKOWQ92917 476 aaPredicted RBP eCLIP18.27■□□□□ 0.52
CCDC90B-201ENST00000260054 ZCCHC17Q9NP64 241 aaKnown RBP18.27■□□□□ 0.52
CCDC90B-201ENST00000260054 DAXXQ9UER7 740 aaPredicted RBP18.27■□□□□ 0.52
CCDC90B-201ENST00000260054 A0A0G2JMZ2 1700 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 PEX10O60683 326 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 ZBED4O75132 1171 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 FDX1P10109 184 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 TAL1P17542 331 aaPredicted RBP18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 TMEM132BQ14DG7 1078 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 WWC2Q6AWC2 1192 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 FAM184AQ8NB25 1140 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 PARK7Q99497 189 aaKnown RBP18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 ALG1Q9BT22 464 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 RAVER2Q9HCJ3 691 aaKnown RBP18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 ZNF214Q9UL59 606 aaPredicted RBP18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 MYH6P13533 1939 aa18.26■□□□□ 0.51
CCDC90B-201ENST00000260054 OTUD7BQ6GQQ9 843 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 FBXO11Q86XK2 927 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 CPXCR1Q8N123 301 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 SMCR8Q8TEV9 937 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 COA7Q96BR5 231 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 AGBL1Q96MI9 1066 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 TXNRD2Q9NNW7 524 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 GJB4Q9NTQ9 266 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 BTBD7Q9P203 1132 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 CNMDO75829 334 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 ICAM1P05362 532 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 COL11A1P12107 1806 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 MAP2K2P36507 400 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 FOSBP53539 338 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 TAF1CQ15572 869 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 USH1GQ495M9 461 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 TYW1BQ6NUM6 668 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 WASF1Q92558 559 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 AMNQ9BXJ7 453 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 BARHL2Q9NY43 387 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 VPS54Q9P1Q0 977 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 RBPJLQ9UBG7 517 aa18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 CTDP1Q9Y5B0 961 aaPredicted RBP18.25■□□□□ 0.51
CCDC90B-201ENST00000260054 STXBP3O00186 592 aa18.24■□□□□ 0.51
CCDC90B-201ENST00000260054 REM2Q8IYK8 340 aaPredicted RBP18.24■□□□□ 0.51
CCDC90B-201ENST00000260054 MB21D1Q8N884 522 aa18.24■□□□□ 0.51
CCDC90B-201ENST00000260054 PAGR1Q9BTK6 254 aa18.24■□□□□ 0.51
CCDC90B-201ENST00000260054 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
CCDC90B-201ENST00000260054 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 ATP2A1O14983 1001 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 OAZ1P54368 228 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 CCPG1Q9ULG6 757 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 RABGAP1Q9Y3P9 1069 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 KIF3AQ9Y496 699 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 SMCHD1A6NHR9 2005 aa18.23■□□□□ 0.51
CCDC90B-201ENST00000260054 hCG_1984214I3L0E3 225 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 SNRNP48Q6IEG0 339 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 ZNF713Q8N859 430 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 GTF3C2Q8WUA4 911 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 TEX13BQ9BXU2 312 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 RIPK3Q9Y572 518 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 PCNTO95613 3336 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 STAT3P40763 770 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 PLS1Q14651 629 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 Q3C1V9 767 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 LARP1BQ659C4 914 aaKnown RBP18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 C8orf76Q96K31 380 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 SH3GLB2Q9NR46 395 aa18.22■□□□□ 0.51
CCDC90B-201ENST00000260054 CEP350Q5VT06 3117 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 SYT1P21579 422 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 NAPAP54920 295 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 GUCY1B3Q02153 619 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 CRHR2Q13324 411 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 SPATC1LQ9H0A9 340 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 KCNJ14Q9UNX9 436 aa18.21■□□□□ 0.51
CCDC90B-201ENST00000260054 CA12O43570 354 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 TLR2O60603 784 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 ALAS1P13196 640 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 DDIT3P35638 169 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 ERVK-9P63128 1117 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 ERVK-24P63145 666 aa18.2■□□□□ 0.5
CCDC90B-201ENST00000260054 KRT40Q6A162 431 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms