RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CDHR2Q9BYE9 1310 aa13.7□□□□□ -0.22
USP30-201ENST00000257548 KLK7P49862 253 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 MGARPQ8TDB4 240 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 SPAG5Q96R06 1193 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 CHUKO15111 745 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 PRCPP42785 496 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 LETM2Q2VYF4 491 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 FBXO2Q9UK22 296 aaPredicted RBP13.69□□□□□ -0.22
USP30-201ENST00000257548 KCNK3O14649 394 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 SYF2O95926 243 aaKnown RBP13.69□□□□□ -0.22
USP30-201ENST00000257548 LLGL1Q15334 1064 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.69□□□□□ -0.22
USP30-201ENST00000257548 OR2W6PQ8NHA6 318 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 NOX5Q96PH1 765 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 SLC39A2Q9NP94 309 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 SEC31BQ9NQW1 1179 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 KCND1Q9NSA2 647 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 RAB21Q9UL25 225 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 SRCAPQ6ZRS2 3230 aa13.69□□□□□ -0.22
USP30-201ENST00000257548 CYP2D7A0A087X1C5 515 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 PP2D1A8MPX8 630 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 EPHB4P54760 987 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 FAM47AQ5JRC9 791 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 TRIM68Q6AZZ1 485 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 TEX11Q8IYF3 940 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 CACNA2D3Q8IZS8 1091 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 THOC1Q96FV9 657 aaKnown RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 PAIP2Q9BPZ3 127 aaKnown RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 KLC4Q9NSK0 619 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 GGT7Q9UJ14 662 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 HPSEQ9Y251 543 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 ZSCAN5CA6NGD5 496 aaPredicted RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 MEFVO15553 781 aaPredicted RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 SPATA4Q8NEY3 305 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
USP30-201ENST00000257548 STIM2Q9P246 746 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 HYOU1Q9Y4L1 999 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 FAM133BQ5BKY9 247 aaKnown RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
USP30-201ENST00000257548 CCDC170Q8IYT3 715 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 KAT2BQ92831 832 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 TNKSO95271 1327 aa13.68□□□□□ -0.22
USP30-201ENST00000257548 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
USP30-201ENST00000257548 YY1AP1Q9H869 796 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 KANSL2Q9H9L4 492 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 DNM2P50570 870 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
USP30-201ENST00000257548 FAM114A1Q8IWE2 563 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 MB21D1Q8N884 522 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 H7C1D1 291 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 FMNL1O95466 1100 aaPredicted RBP13.67□□□□□ -0.22
USP30-201ENST00000257548 PLEKP08567 350 aaPredicted RBP13.67□□□□□ -0.22
USP30-201ENST00000257548 ZNF18P17022 549 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 TMOD1P28289 359 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 SOGA3Q5TF21 947 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 ANKS4BQ8N8V4 417 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 HPS3Q969F9 1004 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 NBPF3Q9H094 633 aa13.67□□□□□ -0.22
USP30-201ENST00000257548 BMP15O95972 392 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 KRT13P13646 458 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 IFNAR1P17181 557 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 MCAMP43121 646 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 CARSP49589 748 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 HDLBPQ00341 1268 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 TRMT1LQ7Z2T5 733 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 TBC1D1Q86TI0 1168 aaPredicted RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 FERMT2Q96AC1 680 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 CNOT6LQ96LI5 555 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 TRAF5O00463 557 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 SLC5A1P13866 664 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 TOB1P50616 345 aaPredicted RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 TNNC1P63316 161 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 ADCY1Q08828 1119 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 ATG9AQ7Z3C6 839 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 AP1M1Q9BXS5 423 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 MKNK2Q9HBH9 465 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 PXDNQ92626 1479 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 PLEKHA8P1O95397 391 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 TCP1P17987 556 aaKnown RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 BICDL1Q6ZP65 573 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 CRACR2BQ8N4Y2 399 aaPredicted RBP13.66□□□□□ -0.22
USP30-201ENST00000257548 ZIM3Q96PE6 472 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 CCT8L2Q96SF2 557 aa13.66□□□□□ -0.22
USP30-201ENST00000257548 LSP1P33241 339 aa13.65□□□□□ -0.22
USP30-201ENST00000257548 MYO1EQ12965 1108 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms