RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 UBXN4Q92575 508 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 LZTFL1Q9NQ48 299 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 TADA3O75528 432 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 USP17L8P0C7I0 530 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 PPP2R5BQ15173 497 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 TMEM165Q9HC07 324 aa12.69□□□□□ -0.38
PDE6B-201ENST00000255622 TSPY2A6NKD2 308 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 DDAH1O94760 285 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 ATP2C1P98194 919 aaPredicted RBP12.68□□□□□ -0.38
PDE6B-201ENST00000255622 RAD9BQ6WBX8 426 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 GOLGA5Q8TBA6 731 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 FERMT2Q96AC1 680 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CCDC34Q96HJ3 373 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 TSPAN18Q96SJ8 248 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 FAM205AQ6ZU69 1335 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 AKR1B15C9JRZ8 316 aaPredicted RBP12.68□□□□□ -0.38
PDE6B-201ENST00000255622 SEC31AO94979 1220 aaKnown RBP12.68□□□□□ -0.38
PDE6B-201ENST00000255622 SCG2P13521 617 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 PEX19P40855 299 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
PDE6B-201ENST00000255622 FAM53CQ9NYF3 392 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
PDE6B-201ENST00000255622 FHOD1Q9Y613 1164 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 TUBB4AP04350 444 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CALM1P0DP23 149 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CALM2P0DP24 149 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CALM3P0DP25 149 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CDKAL1Q5VV42 579 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 RCSD1Q6JBY9 416 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 CLEC4GQ6UXB4 293 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 FMNL3Q8IVF7 1028 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 DYNLL2Q96FJ2 89 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 MCM9Q9NXL9 1143 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 EP400Q96L91 3159 aa12.68□□□□□ -0.38
PDE6B-201ENST00000255622 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
PDE6B-201ENST00000255622 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 HIBADHP31937 336 aaKnown RBP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 CASP14P31944 242 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 RPS8P62241 208 aaKnown RBP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 AMIGO3Q86WK7 504 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 OATP04181 439 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 FXR1P51114 621 aaKnown RBP eCLIP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 ADCY2Q08462 1091 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 PDXDC2PQ6P474 469 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 RASGRP2Q7LDG7 609 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 N4BP2L2Q92802 583 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 GSDMAQ96QA5 445 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 TRIM6Q9C030 488 aaPredicted RBP12.67□□□□□ -0.38
PDE6B-201ENST00000255622 SPATA31A5Q5VU36 1347 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 SPATA31A7Q8IWB4 1347 aa12.67□□□□□ -0.38
PDE6B-201ENST00000255622 PP2D1A8MPX8 630 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 RRAGBQ5VZM2 374 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 SRRTQ9BXP5 876 aaKnown RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 ZSWIM4Q9H7M6 989 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 THRAP3Q9Y2W1 955 aaKnown RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 MRFAP1Q9Y605 127 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 RNF225M0QZC1 329 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 ORC4O43929 436 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 ABL1P00519 1130 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 GYPCP04921 128 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 PBX1P40424 430 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 CCNHP51946 323 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 FAM98CQ17RN3 349 aaKnown RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 PPFIBP1Q86W92 1011 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 VPS16Q9H269 839 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 IL17RBQ9NRM6 502 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 SPATS2LQ9NUQ6 558 aaKnown RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 GDAQ9Y2T3 454 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 EME2A4GXA9 379 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 TFRCP02786 760 aaKnown RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 MAP3K9P80192 1104 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 TFAP4Q01664 338 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
PDE6B-201ENST00000255622 TATDN2Q93075 761 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 PLIN2Q99541 437 aa12.66□□□□□ -0.38
PDE6B-201ENST00000255622 LAMB1P07942 1786 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 PNMA6AP0CW24 399 aaPredicted RBP12.65□□□□□ -0.38
PDE6B-201ENST00000255622 PPP2R3AQ06190 1150 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 TBC1D8BQ0IIM8 1120 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 KRT31Q15323 416 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 GRIK5Q16478 980 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 IQUBQ8NA54 791 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 SLC44A5Q8NCS7 719 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 GPR101Q96P66 508 aaPredicted RBP12.65□□□□□ -0.38
PDE6B-201ENST00000255622 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
PDE6B-201ENST00000255622 EFCAB8A8MWE9 144 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms