RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 I3L4J1 428 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 PPP2R5CQ13362 524 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 ASPRV1Q53RT3 343 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 HHATQ5VTY9 493 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 ANKFY1Q9P2R3 1169 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 FMNL1O95466 1100 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-201ENST00000254630 MYL7Q01449 175 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 GKAP1Q5VSY0 366 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-201ENST00000254630 FAM196AQ6ZSG2 479 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 GRK7Q8WTQ7 553 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 ADPGKQ9BRR6 497 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 USP44Q9H0E7 712 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 TPCN1Q9ULQ1 816 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 PCDHA4Q9UN74 947 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 RNF123Q5XPI4 1314 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 PHKA1P46020 1223 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 TMC4Q7Z404 712 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 CCDC51Q96ER9 411 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 ASAP1Q9ULH1 1129 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-201ENST00000254630 GIPC1O14908 333 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 PAK2Q13177 524 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 LGSNQ5TDP6 509 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 GBP6Q6ZN66 633 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 CROCCP2Q86T23 111 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 WDR17Q8IZU2 1322 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 DTNBO60941 627 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 LONP1P36776 959 aaKnown RBP9.59□□□□□ -0.87
PTCD3-201ENST00000254630 IRX5P78411 483 aaPredicted RBP9.59□□□□□ -0.87
PTCD3-201ENST00000254630 CUL4BQ13620 913 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 MYSM1Q5VVJ2 828 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 VPS37BQ9H9H4 285 aa9.59□□□□□ -0.87
PTCD3-201ENST00000254630 TTLL1O95922 423 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 SERPINB2P05120 415 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 GBP1P32455 592 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 DENND2CQ68D51 928 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 SYMPKQ92797 1274 aaKnown RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 CDC42BPAQ5VT25 1732 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 IL6STP40189 918 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 BIRC2Q13490 618 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 TTC31Q49AM3 519 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 SCYL2Q6P3W7 929 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 CARD6Q9BX69 1037 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 RAB17Q9H0T7 212 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 CLIC4Q9Y696 253 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 TLR3O15455 904 aaKnown RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 GTPBP6O43824 516 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 UBE3CQ15386 1083 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 HADHQ16836 314 aaKnown RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 ARMCX5Q6P1M9 558 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 KCTD1Q719H9 257 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 CCDC84Q86UT8 332 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 PUS3Q9BZE2 481 aaKnown RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 NLRC4Q9NPP4 1024 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 RABGAP1Q9Y3P9 1069 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 ARHGAP6O43182 974 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 ABL1P00519 1130 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 IFRD2Q12894 506 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 EAF2Q96CJ1 260 aaPredicted RBP9.58□□□□□ -0.88
PTCD3-201ENST00000254630 PSMB7Q99436 277 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 LMBRD1Q9NUN5 540 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 GLI2P10070 1586 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 CLTCL1P53675 1640 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 TMOD1P28289 359 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 ITKQ08881 620 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 KRT27Q7Z3Y8 459 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 SLC17A8Q8NDX2 589 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 ZNF577Q9BSK1 485 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 ABCC3O15438 1527 aa9.58□□□□□ -0.88
PTCD3-201ENST00000254630 CAPN9O14815 690 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 FGAP02671 866 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ADKP55263 362 aaKnown RBP9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ZNF445P59923 1031 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 DYNLL1P63167 89 aaKnown RBP9.57□□□□□ -0.88
PTCD3-201ENST00000254630 SCRN1Q12765 414 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 PROSER3Q2NL68 480 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ARMC9Q7Z3E5 817 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 CSRNP1Q96S65 589 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ST7Q9NRC1 585 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 STAT1P42224 750 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ZNF131P52739 623 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 SEPT14Q6ZU15 432 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 GPR108Q9NPR9 543 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 CEP152O94986 1710 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 LAD1O00515 517 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 PDE8BO95263 885 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 B4GALNT4Q76KP1 1039 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 KRT12Q99456 494 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 NBPF3Q9H094 633 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 TLR7Q9NYK1 1049 aaKnown RBP9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ROBO2Q9HCK4 1378 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 LRRIQ4A6NIV6 560 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 ZBTB24O43167 697 aaPredicted RBP9.57□□□□□ -0.88
PTCD3-201ENST00000254630 FAM178BQ8IXR5 827 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 LSG1Q9H089 658 aaKnown RBP9.57□□□□□ -0.88
PTCD3-201ENST00000254630 CACYBPQ9HB71 228 aaKnown RBP9.57□□□□□ -0.88
PTCD3-201ENST00000254630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.57□□□□□ -0.882e-7■■□□□ 13.7
PTCD3-201ENST00000254630 AKT3Q9Y243 479 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 PHBP35232 272 aa9.57□□□□□ -0.88
PTCD3-201ENST00000254630 SLC12A2P55011 1212 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms