RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 CDK17Q00537 523 aa22.79■■□□□ 1.24
RARA-201ENST00000254066 FKBP4Q02790 459 aaKnown RBP eCLIP22.79■■□□□ 1.24
RARA-201ENST00000254066 RNF187Q5TA31 235 aaPredicted RBP22.79■■□□□ 1.24
RARA-201ENST00000254066 FAM212AQ96EL1 285 aa22.79■■□□□ 1.24
RARA-201ENST00000254066 RNPC3Q96LT9 517 aaKnown RBP22.79■■□□□ 1.24
RARA-201ENST00000254066 PUS7LQ9H0K6 701 aaKnown RBP22.79■■□□□ 1.24
RARA-201ENST00000254066 ZNHIT6Q9NWK9 470 aaKnown RBP22.79■■□□□ 1.24
RARA-201ENST00000254066 A0A087X0B3 334 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 RXRAP19793 462 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 VAV2P52735 878 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 PARP9Q8IXQ6 854 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 P3H4Q92791 437 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 ATP6V0A4Q9HBG4 840 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 RMND1Q9NWS8 449 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 HMGB1P1B2RPK0 211 aaPredicted RBP22.78■■□□□ 1.24
RARA-201ENST00000254066 DEXIO95424 95 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 MDH1P40925 334 aaKnown RBP22.78■■□□□ 1.24
RARA-201ENST00000254066 KIF5AQ12840 1032 aa22.78■■□□□ 1.24
RARA-201ENST00000254066 NRAPQ86VF7 1730 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 NR1D1P20393 614 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 C11orf91Q3C1V1 193 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 RRAGBQ5VZM2 374 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 SMYD4Q8IYR2 804 aaPredicted RBP22.77■■□□□ 1.24
RARA-201ENST00000254066 ARFGAP2Q8N6H7 521 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 CCDC155Q8N6L0 562 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 SLC12A7Q9Y666 1083 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 TRIM75PA6NK02 468 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 TACC1O75410 805 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 EEF1GP26641 437 aaKnown RBP22.77■■□□□ 1.24
RARA-201ENST00000254066 CFAP58Q5T655 872 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 CCDC121Q6ZUS5 278 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 TBC1D10CQ8IV04 446 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 KCNH5Q8NCM2 988 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 ZNF507Q8TCN5 953 aa22.77■■□□□ 1.24
RARA-201ENST00000254066 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
RARA-201ENST00000254066 SLC8A3P57103 927 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 ZNF658Q5TYW1 1059 aaPredicted RBP22.76■■□□□ 1.23
RARA-201ENST00000254066 CCDC125Q86Z20 511 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.76■■□□□ 1.23
RARA-201ENST00000254066 LACRTQ9GZZ8 138 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 MYH7P12883 1935 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 RCAN1P53805 252 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 PPP2R5AQ15172 486 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 TMEM67Q5HYA8 995 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 CYB5D1Q6P9G0 228 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 IFT20Q8IY31 132 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 HDAC7Q8WUI4 952 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 NELFBQ8WX92 580 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 CCDC114Q96M63 670 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 TRIM6Q9C030 488 aaPredicted RBP22.76■■□□□ 1.23
RARA-201ENST00000254066 PRDM11Q9NQV5 511 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 BTG4Q9NY30 223 aa22.76■■□□□ 1.23
RARA-201ENST00000254066 DDX20Q9UHI6 824 aaKnown RBP22.76■■□□□ 1.23
RARA-201ENST00000254066 LAMB4A4D0S4 1761 aa22.75■■□□□ 1.23
RARA-201ENST00000254066 PDS5AQ29RF7 1337 aaKnown RBP22.75■■□□□ 1.23
RARA-201ENST00000254066 USO1O60763 962 aaKnown RBP22.75■■□□□ 1.23
RARA-201ENST00000254066 ATP1A2P50993 1020 aa22.75■■□□□ 1.23
RARA-201ENST00000254066 HAUS3Q68CZ6 603 aa22.75■■□□□ 1.23
RARA-201ENST00000254066 PLBD2Q8NHP8 589 aa22.75■■□□□ 1.23
RARA-201ENST00000254066 SYMPKQ92797 1274 aaKnown RBP22.75■■□□□ 1.23
RARA-201ENST00000254066 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
RARA-201ENST00000254066 PARP1P09874 1014 aaKnown RBP22.74■■□□□ 1.23
RARA-201ENST00000254066 DNM2P50570 870 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 TLDC1Q6P9B6 456 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 FUKQ8N0W3 1084 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 IQCDQ96DY2 449 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 EPSTI1Q96J88 318 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 RNF14Q9UBS8 474 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 HYOU1Q9Y4L1 999 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 GTPBP6O43824 516 aaPredicted RBP22.74■■□□□ 1.23
RARA-201ENST00000254066 RTN2O75298 545 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 PAFAH1B1P43034 410 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 IFT88Q13099 833 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 ARMC9Q7Z3E5 817 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 ATP6V1G3Q96LB4 118 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 NHEJ1Q9H9Q4 299 aaPredicted RBP22.74■■□□□ 1.23
RARA-201ENST00000254066 CEP126Q9P2H0 1117 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 KCNJ14Q9UNX9 436 aa22.74■■□□□ 1.23
RARA-201ENST00000254066 EZH2Q15910 746 aaKnown RBP22.73■■□□□ 1.23
RARA-201ENST00000254066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.73■■□□□ 1.239e-7■■■■■ 62.9
RARA-201ENST00000254066 SENP2Q9HC62 589 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 RCCD1A6NED2 376 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 B4E1Z4 1266 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 ZBED6P86452 979 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 GUCY1A3Q02108 690 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 PAK2Q13177 524 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 LACTB2Q53H82 288 aaPredicted RBP22.73■■□□□ 1.23
RARA-201ENST00000254066 SH2D3CQ8N5H7 860 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 MTA3Q9BTC8 594 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 THAP9Q9H5L6 903 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 GDF3Q9NR23 364 aa22.73■■□□□ 1.23
RARA-201ENST00000254066 ZNF233A6NK53 670 aa22.72■■□□□ 1.23
RARA-201ENST00000254066 C8orf74Q6P047 294 aa22.72■■□□□ 1.23
RARA-201ENST00000254066 TTYH3Q9C0H2 523 aa22.72■■□□□ 1.23
RARA-201ENST00000254066 BATF3Q9NR55 127 aa22.72■■□□□ 1.23
RARA-201ENST00000254066 HDLBPQ00341 1268 aaKnown RBP22.72■■□□□ 1.23
RARA-201ENST00000254066 NR5A1Q13285 461 aa22.72■■□□□ 1.23
RARA-201ENST00000254066 ALX1Q15699 326 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms