RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 ZNF569Q5MCW4 686 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 ARFGAP3Q9NP61 516 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 MAPK8IP1Q9UQF2 711 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 N4BP1O75113 896 aaKnown RBP16.66■□□□□ 0.26
UBE4B-201ENST00000253251 PRDX5P30044 214 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 HSPA1LP34931 641 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 STAT2P52630 851 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 TAF3Q5VWG9 929 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 MB21D2Q8IYB1 491 aaPredicted RBP16.66■□□□□ 0.26
UBE4B-201ENST00000253251 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
UBE4B-201ENST00000253251 ORC4O43929 436 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 GRM1Q13255 1194 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
UBE4B-201ENST00000253251 SPATA1Q5VX52 437 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 ANKRD35Q8N283 1001 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 DCP1AQ9NPI6 582 aaPredicted RBP16.66■□□□□ 0.26
UBE4B-201ENST00000253251 ABCD1P33897 745 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 NDUFA8P51970 172 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 TNNC1P63316 161 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 TRPC3Q13507 836 aa16.66■□□□□ 0.26
UBE4B-201ENST00000253251 PPP1R18Q6NYC8 613 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 DYDC1Q8WWB3 177 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 BLZF1Q9H2G9 400 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 SHTN1A0MZ66 631 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 RPN1P04843 607 aaKnown RBP16.65■□□□□ 0.26
UBE4B-201ENST00000253251 KRT9P35527 623 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 SEPT2Q15019 361 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 SH3RF3Q8TEJ3 882 aaPredicted RBP16.65■□□□□ 0.26
UBE4B-201ENST00000253251 MTUS1Q9ULD2 1270 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 TESPA1A2RU30 521 aaPredicted RBP16.65■□□□□ 0.26
UBE4B-201ENST00000253251 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 ADD3Q9UEY8 706 aaKnown RBP16.65■□□□□ 0.26
UBE4B-201ENST00000253251 NTSR2O95665 410 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 CLUL1Q15846 466 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 LZTFL1Q9NQ48 299 aa16.65■□□□□ 0.26
UBE4B-201ENST00000253251 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
UBE4B-201ENST00000253251 AP3B2Q13367 1082 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
UBE4B-201ENST00000253251 PIGSQ96S52 555 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 MLXIPQ9HAP2 919 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 C21orf2O43822 256 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 ECE2O60344 883 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 GAP43P17677 238 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 OSBPP22059 807 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 FAM26FQ5R3K3 315 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 ARMC9Q7Z3E5 817 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 SGMS1Q86VZ5 419 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 GPT2Q8TD30 523 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 NOX5Q96PH1 765 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 SRPRBQ9Y5M8 271 aaKnown RBP16.64■□□□□ 0.25
UBE4B-201ENST00000253251 SLC8A3P57103 927 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 YWHAEP62258 255 aaKnown RBP16.64■□□□□ 0.25
UBE4B-201ENST00000253251 GPSM2P81274 684 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 GADL1Q6ZQY3 521 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 TBC1D10CQ8IV04 446 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 CCDC155Q8N6L0 562 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 JPH2Q9BR39 696 aaPredicted RBP16.64■□□□□ 0.25
UBE4B-201ENST00000253251 NRBP2Q9NSY0 501 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 HSF2BPO75031 334 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 SLFN14P0C7P3 912 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 MORC3Q14149 939 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 LINC00116Q8NCU8 138 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 DEPTORQ8TB45 409 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 PANK4Q9NVE7 773 aa16.64■□□□□ 0.25
UBE4B-201ENST00000253251 IKBKBO14920 756 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 ATP2A1O14983 1001 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 FAM160B1Q5W0V3 765 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 CTR9Q6PD62 1173 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 ZBTB8OSQ8IWT0 167 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 GLG1Q92896 1179 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 CCDC77Q9BR77 488 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 CSRNP2Q9H175 543 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
UBE4B-201ENST00000253251 EXOC8Q8IYI6 725 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 HACE1Q8IYU2 909 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 TSKSQ9UJT2 592 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 NOD1Q9Y239 953 aa16.63■□□□□ 0.25
UBE4B-201ENST00000253251 DHTKD1Q96HY7 919 aaPredicted RBP16.63■□□□□ 0.25
UBE4B-201ENST00000253251 FSD2A1L4K1 749 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 GSG1L2A8MUP6 293 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 KCNJ18B7U540 433 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 KCNJ12Q14500 433 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 KCTD2Q14681 263 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 PAGR1Q9BTK6 254 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 XRCC5P13010 732 aaKnown RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 PRR5LQ6MZQ0 368 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 LARP4BQ92615 738 aaKnown RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 STAMQ92783 540 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 LARGE1O95461 756 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 SMC1AQ14683 1233 aaKnown RBP16.62■□□□□ 0.25
UBE4B-201ENST00000253251 SYT10Q6XYQ8 523 aa16.62■□□□□ 0.25
UBE4B-201ENST00000253251 NELFCDQ8IXH7 590 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms