RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 SAP30BPQ9UHR5 308 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 FAN1Q9Y2M0 1017 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 PARP1P09874 1014 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 MCM7P33993 719 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 MIIPQ5JXC2 388 aa13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 NSUN4Q96CB9 384 aaKnown RBP13.45□□□□□ -0.26
SEC61A1-201ENST00000243253 ZNF263O14978 683 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 CALM1P0DP23 149 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 CALM2P0DP24 149 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 CALM3P0DP25 149 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 CYP2D6P10635 497 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 SCG2P13521 617 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 CRKLP46109 303 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 C8orf37Q96NL8 207 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 DISC1Q9NRI5 854 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 IL17RBQ9NRM6 502 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 H7C1D1 291 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 RHOBTB3O94955 611 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 MYBL2P10244 700 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 KRT9P35527 623 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 LONP1P36776 959 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 RRAGBQ5VZM2 374 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 ZSCAN29Q8IWY8 852 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 PDE2AO00408 941 aaPredicted RBP13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 RHOXF2BP0C7M4 288 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 KIF4BQ2VIQ3 1234 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 PIK3AP1Q6ZUJ8 805 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 RHOXF2Q9BQY4 288 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 ANKIB1Q9P2G1 1089 aa13.44□□□□□ -0.26
SEC61A1-201ENST00000243253 USP17L12C9JPN9 530 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 USP17L21D6R901 530 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 N4BP3O15049 544 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 GOLGA8HP0CJ92 632 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 SRGNP10124 158 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 MCM6Q14566 821 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 CATIPQ7Z7H3 387 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 ANKS1AQ92625 1134 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 GPKOWQ92917 476 aaPredicted RBP eCLIP13.43□□□□□ -0.262e-6■■■□□ 15
SEC61A1-201ENST00000243253 TARSL2A2RTX5 802 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 FILIP1LQ4L180 1135 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 FAM71BQ8TC56 605 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 PCMTD1Q96MG8 357 aaPredicted RBP13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 THAP9Q9H5L6 903 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 DCP1AQ9NPI6 582 aaPredicted RBP13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 AGPAT5Q9NUQ2 364 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 VPS18Q9P253 973 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 HPCAL4Q9UM19 191 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 TNRC6CQ9HCJ0 1690 aaKnown RBP13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 CTAGE15A4D2H0 777 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 MYO1CO00159 1063 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 TRIM66O15016 1216 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 CTAGE8P0CG41 777 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 XBP1P17861 261 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 SPAG1Q07617 926 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 FBXO33Q7Z6M2 555 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 CTAGE6Q86UF2 777 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 CTAGE4Q8IX94 777 aa13.43□□□□□ -0.26
SEC61A1-201ENST00000243253 ROBO3Q96MS0 1386 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 KIF13BQ9NQT8 1826 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 SHOX2O60902 331 aaPredicted RBP13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 DNA2P51530 1060 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 ITPK1Q13572 414 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 HAUS4Q9H6D7 363 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 SH3GLB2Q9NR46 395 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 ARFGEF1Q9Y6D6 1849 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 TSPY2A6NKD2 308 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 CYTH3O43739 400 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 EEF1GP26641 437 aaKnown RBP13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 KLK7P49862 253 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 SEMA3FQ13275 785 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 ERFEQ4G0M1 354 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 SBK1Q52WX2 424 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 COBLL1Q53SF7 1204 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 DAGLBQ8NCG7 672 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 MYH10P35580 1976 aa13.42□□□□□ -0.26
SEC61A1-201ENST00000243253 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 SRGAP2O75044 1071 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 LCA5LO95447 670 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 TUBBP07437 444 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 HNRNPH3P31942 346 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 CDK17Q00537 523 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 OR8K1Q8NGG5 319 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 NUP88Q99567 741 aaPredicted RBP13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 PYM1Q9BRP8 204 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 MAD2L2Q9UI95 211 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 EP400Q96L91 3159 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 ENC1O14682 589 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 UBXN1Q04323 297 aa13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 ENOX2Q16206 610 aaKnown RBP13.41□□□□□ -0.26
SEC61A1-201ENST00000243253 PARP10Q53GL7 1025 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms